Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq2471 104 1e-20 seq3406 71.6 8e-11 >seq2471 Length=2597 Score = 104 bits (114), Expect = 1e-20 Identities = 94/117 (80%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||| |||| | ||||||||| | | |||| |||||| | | Sbjct 1904 GAACCCAAAAACTTTGGTTTCCCATAAGGTGCCAAAGGGGTCATCCA-ATAACACCCTCT 1846 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||| ||||| ||||| ||||| |||| |||||||||||||||||||||| Sbjct 1845 GATCCCTAGTTGGCATCGTTTATGGTTAGAACTAGGACGGTATCTGATCGTCTTCGA 1789 >seq3406 Length=16985 Score = 71.6 bits (78), Expect = 8e-11 Identities = 48/54 (89%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 ||| ||||||||||||||||| ||| ||| ||||||||||||| ||||||||| Sbjct 16614 ATCGCTAGTCGGCATAGTTTATGGTAGAGATTACGACGGTATCTAATCGTCTTC 16561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278390697960