Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq1644 100 7e-19 seq1515 93.3 1e-16 seq1216 84.2 6e-14 >seq1644 Length=4506 Score = 100 bits (110), Expect = 7e-19 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 15 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCG 74 ||| | |||| |||| |||||||||||||||||||| ||| || | ||||||||| || Sbjct 665 AAGTATCGGCAAACTCCGTGCCAGCAGCCGCGGTAAAACGGGGGATACAAGCGTTATCCG 606 Query 75 GAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 ||||||||||||||||||||| | ||| |||| Sbjct 605 GAATTACTGGGCGTAAAGCGTATGTAGGTGGTT 573 >seq1515 Length=47061 Score = 93.3 bits (102), Expect = 1e-16 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 22 GGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTAC 81 ||| || | |||||||||||||||||||| || || | ||||||||| ||||||||| Sbjct 12910 GGCAAATTCCGTGCCAGCAGCCGCGGTAAAACAGGGGATACAAGCGTTATCCGGAATTAC 12969 Query 82 TGGGCGTAAAGCGTGCGCAGGCGGTT 107 |||||||||||||| ||||| |||| Sbjct 12970 TGGGCGTAAAGCGTATGCAGGTGGTT 12995 >seq1216 Length=6849 Score = 84.2 bits (92), Expect = 6e-14 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 22 GGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTAC 81 ||| |||| | ||||||||| ||| |||| ||| || | ||||||||| ||||||||| Sbjct 3015 GGCAAACTCCTTGCCAGCAGGCGCTGTAAAACGGGGGATACAAGCGTTATCCGGAATTAC 2956 Query 82 TGGGCGTAAAGCGTGCGCAGGCGGTT 107 |||||||||||||| | ||| |||| Sbjct 2955 TGGGCGTAAAGCGTATGTAGGTGGTT 2930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289554038656