Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1644 239 1e-60 >seq1644 Length=4506 Score = 239 bits (264), Expect = 1e-60 Identities = 263/345 (76%), Gaps = 10/345 (3%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||||||| | ||| | |||||||||| ||| | |||||| |||| ||||||| Sbjct 3657 ATCTTCACAGACATTTCTATTTCACCGAATCTTTCTCCAAGACAGCATCCAAGTCGTTAC 3598 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 3597 ACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATA 3538 Query 129 GTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTCTAACAGATCCC 187 ||||| ||||||||||||||| ||||| | | | | || | | || || Sbjct 3537 GTTACAGCCGCCGTTTACTGGAGCTTATAAT-AATAATATAATATTATATATATTAT--T 3481 Query 188 CTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGA 247 ||||| | ||||||| ||||||| ||||| || ||||| || | ||||||| || Sbjct 3480 TTTAACTTACCAGCACTGGGCAGGTGTCAGTCCCCTTACATTGTAATTACACTTAGCGGA 3421 Query 248 AACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGACAGG 307 || |||||||||| ||||||||||||||| || ||| ||| ||| | | | || Sbjct 3420 GACTTGTGTTTTTGATAAACAGTCGCTTGGATCTTTTCATTGCAGCC---CTTTG---GG 3367 Query 308 CACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || || || |||| ||||||| || | |||||||||||||||||| Sbjct 3366 CATCCTTTTTCCCGAAGTTACAGGATTATTTTGCCGAGTTCCTTA 3322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062362136064