Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2471 313 4e-83 seq3430 264 2e-68 >seq2471 Length=2597 Score = 313 bits (346), Expect = 4e-83 Identities = 219/246 (89%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 14 CGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2274 CGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 2215 Query 74 TCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC-ATAG 132 | || | |||| |||| |||| ||||||||||||||| |||| || | | | Sbjct 2214 TTC--CTGACTTTGGTTGGATACCAACAGTCCCTCTAAGAAGTTTACCACGAATCGAGAT 2157 Query 133 TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATC 192 ||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 2156 TCGC-GTAACTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATC 2098 Query 193 ACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAA 252 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2097 ACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAA 2038 Query 253 TCTGTC 258 |||||| Sbjct 2037 TCTGTC 2032 >seq3430 Length=16798 Score = 264 bits (292), Expect = 2e-68 Identities = 195/225 (87%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 35 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAA 94 ||||||||||||||||||||||||||||||||||||||| ||||||||| | | | || Sbjct 12585 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCGCAAACTTCCTTGCGTTAGAC 12526 Query 95 GCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGAT-GGGGCTATTTAGCAGG 153 | | ||||||||||||||| | |||| || | || | |||||||||||| Sbjct 12525 ACGCAAAGTCCCTCTAAGAAGTGGTACGATAACCGAAG-CTATCGACCCTATTTAGCAGG 12467 Query 154 TTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGC 213 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 12466 CGAAGGTCTCGTTCGTTATCGAAATTAACCAGACAAATCACTCCACCAACTAAGAACGGC 12407 Query 214 CATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12406 CATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 12362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796772489484