Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3187 318 1e-84 seq1297 298 9e-79 seq754 293 4e-77 seq901 291 1e-76 seq1432 273 4e-71 seq20 273 4e-71 seq289 253 3e-65 seq2414 232 1e-58 seq117 226 5e-57 seq2847 118 2e-24 seq3111 89.7 9e-16 seq421 82.4 1e-13 seq1644 78.8 2e-12 >seq3187 Length=81671 Score = 318 bits (352), Expect = 1e-84 Identities = 226/259 (87%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 ||||||||||||||||||||||| || |||||||||||||||||||||||| |||||| | Sbjct 27208 CAGTAGGGTAAAACTAACCTGTCCCACGACGGTCTAAACCCAGCTCACGTTTCCTATTGG 27267 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 ||||||||||||| || ||| || |||||| || | |||||||||||||||||| Sbjct 27268 CGGGTGAACAATCCGACTCTTTGAGACTTCTGCATCTCATTAATAGGAAGAGCCGACATC 27327 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 27328 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACCAGCCAGTTATCCCTGT 27387 Query 215 GGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCAC 274 ||||||||||||| |||||||||| || |||| | |||||||||||||||| || Sbjct 27388 GGTAACTTTTCTGACACCTCTAGCTGAAAGTTTCTCAGACCTAAAGGATCGATAGGTCAT 27447 Query 275 ACTTTCATGGTTTGTATTC 293 |||||| |||||||||| Sbjct 27448 GCTTTCACAGTTTGTATTC 27466 >seq1297 Length=6705 Score = 298 bits (330), Expect = 9e-79 Identities = 222/261 (85%), Gaps = 8/261 (3%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 6351 ATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATT 6410 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 | ||||||||||||| || ||| || |||||| || ||||||||||||||||||| Sbjct 6411 GGCGGGTGAACAATCCGACACTTTGAGACTTCTGCGTCTCAATGATAGGAAGAGCCGACA 6470 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 ||||||||||||||||||||||||||||| |||||| |||| |||||| |||| Sbjct 6471 TCGAAGGATCAAAAAGCAACGTCGCTATGGACGCTTAGCTGTCACAAG--------CCCT 6522 Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 ||||||||||||||| |||||||||| || |||| | ||||||||| |||||||| Sbjct 6523 GTGGTAACTTTTCTGACACCTCTAGCTGAAAGTTTCTCAGACCTAAAGGATAGATAGGCC 6582 Query 273 ACACTTTCATGGTTTGTATTC 293 | |||||| |||||||||| Sbjct 6583 ATGCTTTCACAGTTTGTATTC 6603 >seq754 Length=12608 Score = 293 bits (324), Expect = 4e-77 Identities = 221/261 (85%), Gaps = 8/261 (3%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 327 ATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATT 386 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 | ||| ||||||||| || ||| || |||||| || ||||||||||||||||||| Sbjct 387 GGCGGGGGAACAATCCGACACTTTGAGACTTCTGCGTCTCAATGATAGGAAGAGCCGACA 446 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 ||||||||||||||||||||||||||||| |||||| |||| |||||| |||| Sbjct 447 TCGAAGGATCAAAAAGCAACGTCGCTATGGACGCTTAGCTGTCACAAG--------CCCT 498 Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 ||||||||||||||| |||||||||| || |||| | ||||||||| |||||||| Sbjct 499 GTGGTAACTTTTCTGACACCTCTAGCTGAAAGTTTCTCAGACCTAAAGGATAGATAGGCC 558 Query 273 ACACTTTCATGGTTTGTATTC 293 | |||||| |||||||||| Sbjct 559 ATGCTTTCACAGTTTGTATTC 579 >seq901 Length=10758 Score = 291 bits (322), Expect = 1e-76 Identities = 221/261 (85%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||||||||||||| ||||||| |||||| |||||||||||||||||||| ||| Sbjct 1564 ATCAGTAGGGTAAAACTAACGTGTCTCACGACGGTGTAAACCCAGCTCACGTTCCCCATT 1505 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 | |||||||||||| || ||| || |||||| || | ||||||| ||||||||||| Sbjct 1504 GGCGGGTGAACAATCAGACACTTTGAGACTTCTGCGTCCGAATGATAGAAAGAGCCGACA 1445 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 ||||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 1444 TCGAAGGATTAAAAGGCAACGTCGCTGTGAACTCTTGGCTGCCACAAGCCAGTTATCCCT 1385 Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 |||||| |||||||| ||||||||| || |||| | ||| ||||||||||||| Sbjct 1384 GTGGTAGCTTTTCTGACACCTCTAGTTGAAAGTTTCTCAGACCTACGGGATCGATAGGCC 1325 Query 273 ACACTTTCATGGTTTGTATTC 293 | || ||| |||||||||| Sbjct 1324 ATGCTCTCACAGTTTGTATTC 1304 >seq1432 Length=5606 Score = 273 bits (302), Expect = 4e-71 Identities = 174/189 (92%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 201 ATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATT 142 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 | ||||||||||||| || ||| || |||||| || ||||||||||| ||||||| Sbjct 141 GGCGGGTGAACAATCCGACACTTTGAGACTTCTGCGTCCCAATGATAGGAAGGGCCGACA 82 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 81 CCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 22 Query 213 GTGGTAACT 221 ||||||||| Sbjct 21 GTGGTAACT 13 >seq20 Length=61405 Score = 273 bits (302), Expect = 4e-71 Identities = 171/184 (93%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 34 TCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTA 93 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 61222 TCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTG 61281 Query 94 GTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACAT 153 | ||||||||||||| || ||| || |||||| || |||||||||||||||||||| Sbjct 61282 GCGGGTGAACAATCCGACACTTTGAGACTTCTGCGTCCCAATGATAGGAAGAGCCGACAT 61341 Query 154 CGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTG 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61342 CGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTG 61401 Query 214 TGGT 217 |||| Sbjct 61402 TGGT 61405 >seq289 Length=5331 Score = 253 bits (280), Expect = 3e-65 Identities = 160/173 (92%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 34 TCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTA 93 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 5159 TCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTG 5218 Query 94 GTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACAT 153 | ||||||||||||| || ||| || |||||| || |||||||||||||||||||| Sbjct 5219 GCGGGTGAACAATCCGACACTTTGAGACTTCTGCGTCTCAATGATAGGAAGAGCCGACAT 5278 Query 154 CGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5279 CGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 5331 >seq2414 Length=1990 Score = 232 bits (256), Expect = 1e-58 Identities = 148/161 (92%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 34 TCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTA 93 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 161 TCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTG 102 Query 94 GTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACAT 153 | ||||||||||||| || ||| || |||||| || |||||||||||||||||||| Sbjct 101 GCGGGTGAACAATCCGACACTTTGAGACTTCTGCGTCCCAATGATAGGAAGAGCCGACAT 42 Query 154 CGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGC 194 ||||||||||||||||||||||||||||||||||||||||| Sbjct 41 CGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGC 1 >seq117 Length=9813 Score = 226 bits (250), Expect = 5e-57 Identities = 146/160 (91%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8511 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 8570 Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGG 253 |||||||||||||||||||||||||||||||||| |||||||||| || |||| | Sbjct 8571 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTGAAAGTTTCTCAGA 8630 Query 254 ACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||||||||||||||||||| |||||| |||||||||| Sbjct 8631 CCTAAAGGATCGATAGGCCATGCTTTCACAGTTTGTATTC 8670 >seq2847 Length=33222 Score = 118 bits (130), Expect = 2e-24 Identities = 85/98 (87%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||| Sbjct 32353 ATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGGTCAGGTTCCCTATT 32294 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130 | |||| |||||||| || ||| || |||||| || Sbjct 32293 GGCGGGTAAACAATCCGACACTTTGAGACTTCTGCGTC 32256 >seq3111 Length=30806 Score = 89.7 bits (98), Expect = 9e-16 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 147 CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 ||| |||||| || || | ||||||| |||||||||| |||||||||||| |||||| Sbjct 6431 CCGGCATCGAGAAATGAACACGCAACGTAGCTATGAACGTTTGGCTGCCACAGTCCAGTT 6372 Query 207 ATCCCTGTGGTAACTTTTCTGGCACCT 233 ||||||||| ||||| |||| ||||| Sbjct 6371 GTCCCTGTGGAAACTTGTCTGACACCT 6345 >seq421 Length=1950 Score = 82.4 bits (90), Expect = 1e-13 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| || |||| | |||||||||||||||| Sbjct 1950 CTGTGGTAACTTTTCTGACACCTCTAGCTGAAAGTTTCTCAGACCTAAAGGATCGATAGG 1891 Query 271 CCACACTTTCATGGTTTGTATTC 293 ||| ||||| |||||||||| Sbjct 1890 CCATGCTTTCGCAGTTTGTATTC 1868 >seq1644 Length=4506 Score = 78.8 bits (86), Expect = 2e-12 Identities = 123/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||||||| || ||| |||| ||||| ||||| Sbjct 4212 CTGTCTCACGACGTTCTGAACCCAGCTCACGTGCCGCTTTAATGGGCGAACAGACCAACC 4153 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| | ||| || || | ||| || ||||||||||||| | ||| | Sbjct 4152 CTTGAGACCTACTTCAGCCTC---AGGATGCGACGAGCCGACATCGAGGTGCCAACCCTC 4096 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 |||| || |||| | || | | |||| ||||||||| ||||||||| Sbjct 4095 CCCGTCAATAGGAACTTTCGGGGGAGATCAGCCTGTTATCCCTAGAGTAACTTTT 4041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854369549184