Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq2729 75.2 3e-11 seq1644 73.4 1e-10 >seq2729 Length=1445 Score = 75.2 bits (82), Expect = 3e-11 Identities = 83/106 (78%), Gaps = 5/106 (5%) Strand=Plus/Minus Query 267 CATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCAC 326 || ||||||||| | || ||| |||| | | || | |||||||| ||||||||||| Sbjct 349 CAAACGGTTTCACGTACTTTTTAACTCTCTTTTCAAAG-TTCTTTTCATCTTTCCCTCAC 291 Query 327 GGTACTAGTTCACTATCGGTCAGTCA-GT-AGTATTTAGCCTTGGA 370 |||||| |||| ||||||||| ||| || |||||||||| || || Sbjct 290 GGTACTTGTTCGCTATCGGTC--TCACGTCAGTATTTAGCTTTAGA 247 >seq1644 Length=4506 Score = 73.4 bits (80), Expect = 1e-10 Identities = 51/57 (89%), Gaps = 1/57 (2%) Strand=Plus/Minus Query 286 TTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTAT 342 ||||||| |||| ||||||| ||||||| |||||||| |||||||||||||||||| Sbjct 2218 TTTCACTTCCCT-TCCGGGGATCTTTTCATCTTTCCCTTACGGTACTAGTTCACTAT 2163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241555749376