Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq1644 105 1e-20 seq1515 105 1e-20 seq1216 86.0 1e-14 >seq1644 Length=4506 Score = 105 bits (116), Expect = 1e-20 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||| | || | | ||||| || || ||||||||| ||||||||||||||| ||||| | Sbjct 752 TCAAGCTTGCGCTCATTGCAGAAGATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGGCTG 811 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 | | ||| |||||||||||| | || |||||||| | ||||| |||| ||| ||| | Sbjct 812 TATTTCAATCCCAATGTGGCTGATCCCCCTCTCAGGGCAGCTACTGATCTTCGCCTTAAT 871 Query 133 GGGCTATTATCTCACCAACTACCTAATC 160 | |||||||| | || || |||||| Sbjct 872 AAGTTATTATCTTATTAATTAGCTAATC 899 >seq1515 Length=47061 Score = 105 bits (116), Expect = 1e-20 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||| | || | | ||||| || || ||||||||| ||||||||||||||| ||||| | Sbjct 12816 TCAAGCTTGCGCTCATTGCAGAAGATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGGCTG 12757 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 | | ||| |||||||||||| | || |||||||| | ||||| |||| ||| ||| | Sbjct 12756 TATTTCAATCCCAATGTGGCTGATCCCCCTCTCAGGGCAGCTACTGATCTTCGCCTTAAT 12697 Query 133 GGGCTATTATCTCACCAACTACCTAATC 160 | |||||||| | || || |||||| Sbjct 12696 AAGTTATTATCTTATTAATTAGCTAATC 12669 >seq1216 Length=6849 Score = 86.0 bits (94), Expect = 1e-14 Identities = 109/149 (73%), Gaps = 1/149 (1%) Strand=Plus/Plus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||| | || | | ||||| || || | ||||||| ||||||||||||||| ||||| | Sbjct 3104 TCAAGCTTGCGCTCATTGCAGAAGATTCTCCACTGCAGCCTCCCGTAGGAGTTTGGGCTG 3163 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTT-GG 131 | | ||| |||||| ||||| | || |||||||| | ||||| ||| ||| ||| Sbjct 3164 TATTTCAATCCCAAGGTGGCTGATCCCCCTCTCAGGGCAGCTACTAATCTTCGCCTTAAT 3223 Query 132 TGGGCTATTATCTCACCAACTACCTAATC 160 | | |||||||| | || || |||||| Sbjct 3224 TAAGTTATTATCTTATTAATTAGCTAATC 3252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998364417024