Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq1644 190 3e-46 >seq1644 Length=4506 Score = 190 bits (210), Expect = 3e-46 Identities = 145/169 (86%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 108 CGGTCCTCTCGTACTA-AGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGG 166 |||||||||||||||| | || | | | |||| ||| |||| || |||||| || Sbjct 4277 CGGTCCTCTCGTACTAGAAGAAAAATTTT-TCAATGTTCTTACGTTTACACCGGATATGG 4219 Query 167 ACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGC 226 ||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||| Sbjct 4218 ACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTGCCGCTTTAATGGGCGAACAGA 4159 Query 227 CCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||||| |||||||||||||| ||||||| ||||||||||||||| Sbjct 4158 CCAACCCTTGAGACCTACTTCAGCCTCAGGATGCGACGAGCCGACATCG 4110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780773041904