Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2471 277 3e-72 seq2638 149 1e-33 seq3430 100 5e-19 >seq2471 Length=2597 Score = 277 bits (306), Expect = 3e-72 Identities = 250/310 (81%), Gaps = 6/310 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||| | || | | || | |||||||| Sbjct 2123 GAACGAGACCTTAACCTGCTAAATAGTTACGCGAATCTCGATTCGTGGTAAACTTCTTAG 2182 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| | || || | || | | || ||||||||||||||||||||||||||| Sbjct 2183 AGGGACTGTTGGTATCCAACCAAAGTCAGGA--AGGCAATAACAGGTCTGTGATGCCCTT 2240 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||| | || |||| || |||| || Sbjct 2241 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGATGTCAGAGAGTG--TCTCCTTCACC 2298 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||| ||||||||||| |||||| ||||||||||||||||| |||||||||| || Sbjct 2299 GAGAGGTGTGGGTAATCTT-TTAAACATCGTCGTGCTGGGGATAGATCATTGCAATTTTT 2357 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 | |||| |||||||||| ||||||||||||| ||||||||| |||| ||||||||||||| Sbjct 2358 GATCTTAAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTACGTCCCT 2417 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 2418 GCCCTTTGTA 2427 >seq2638 Length=1522 Score = 149 bits (164), Expect = 1e-33 Identities = 141/179 (79%), Gaps = 1/179 (1%) Strand=Plus/Plus Query 150 GCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGG 209 || |||||||||||||||||| | ||||||||| |||||||| ||| || |||| Sbjct 1 GCTGCACGCGCGCTACACTGATGCATGCAACGAGTTT-TCACCTTGTCCGATGGGGCTGG 59 Query 210 GTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACG 269 |||||||||| | ||||| |||||||||| ||||||||| || ||||||||| Sbjct 60 GTAATCTTGTGGGGGTGCATCGTGATGGGGATAGATTATTGCAATTGTTAGTCTTCAACG 119 Query 270 AGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||| |||| |||| ||| ||| ||||||||||||||| ||||| Sbjct 120 AGGAATGCCTAGTAGGCGCAAGTCAGAAGCGTGCGCCGATTACGTCCCTGCCTCTTGTA 178 >seq3430 Length=16798 Score = 100 bits (110), Expect = 5e-19 Identities = 105/134 (78%), Gaps = 3/134 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGC-CGGCTTCTTA 78 || ||||||||| |||||||||||| | |||| || ||| | ||||||| Sbjct 12453 GAACGAGACCTTCGCCTGCTAAATAGGGTCGATAGCTTCGGTTA-TCGTACCACTTCTTA 12511 Query 79 GAGGGACTAT-CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 |||||||| | || || | | | ||||||||| ||||||||||||||||||||||||| Sbjct 12512 GAGGGACTTTGCGTGTCTAACGCAAGGAAGTTTGCGGCAATAACAGGTCTGTGATGCCCT 12571 Query 138 TAGATGTTCTGGGC 151 |||||||||||||| Sbjct 12572 TAGATGTTCTGGGC 12585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947166241792