Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1297 125 1e-26 seq289 125 1e-26 seq20 125 1e-26 seq2414 120 5e-25 seq901 120 5e-25 seq1432 116 6e-24 seq754 116 6e-24 seq2930 111 3e-22 seq2847 107 3e-21 seq3239 96.9 6e-18 seq721 96.9 6e-18 seq367 77.0 5e-12 seq3187 75.2 2e-11 >seq1297 Length=6705 Score = 125 bits (138), Expect = 1e-26 Identities = 100/118 (85%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| || |||||| ||||||| |||| || ||| Sbjct 6319 GTACGAGAGGAACAGTTGG-TTCAGA-TACTTGGTTAATGCGGCTAGCTGAAAAGCTAGT 6262 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 6261 GCCGCGACGCTACCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGC 6204 >seq289 Length=5331 Score = 125 bits (138), Expect = 1e-26 Identities = 100/118 (85%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| || |||||| ||||||| |||| || ||| Sbjct 5126 GTACGAGAGGAACAGTTGG-TTCAGA-TACTTGGTTAATGCGGCTAGCTGAAAAGCTAGT 5069 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 5068 GCCGCGACGCTACCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGC 5011 >seq20 Length=61405 Score = 125 bits (138), Expect = 1e-26 Identities = 100/118 (85%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| || |||||| ||||||| |||| || ||| Sbjct 61189 GTACGAGAGGAACAGTTGG-TTCAGA-TACTTGGTTAATGCGGCTAGCTGAAAAGCTAGT 61132 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 61131 GCCGCGACGCTACCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGC 61074 >seq2414 Length=1990 Score = 120 bits (132), Expect = 5e-25 Identities = 99/118 (84%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| || |||||| ||||||| |||| || ||| Sbjct 194 GTACGAGAGGAACAGTTGG-TTCAGA-TATTTGGTTAATGCGGCTAGCTGAAAAGCTAGT 251 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||| ||||||||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct 252 GCCGCGACGCTACCATCTGTTGGATTATGACTGAACGCCTCTAATTCAGAATCCATGC 309 >seq901 Length=10758 Score = 120 bits (132), Expect = 5e-25 Identities = 99/118 (84%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| | |||||| ||||||| |||| || ||| Sbjct 1596 GTACGAGAGGAACAGTTGG-TTCAGAC-ACTTGGTTAATGCGGCTAGCTGAAAAGCTAGT 1653 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| Sbjct 1654 GCCGCGAAGCTACCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAACCCATGC 1711 >seq1432 Length=5606 Score = 116 bits (128), Expect = 6e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| || |||||| | ||||| |||| || || Sbjct 233 GTACGAGAGGAACAGTTGG-TTCAGA-TACTTGGTTAATACGGCTAGCTGAGAAGCTGGT 290 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| Sbjct 291 GCCGCGAAGCTACCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAACCCATGC 348 >seq754 Length=12608 Score = 116 bits (128), Expect = 6e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| || |||||| | ||||| |||| || || Sbjct 295 GTACGAGAGGAACAGTTGG-TTCAGA-TACTTGGTTAATACGGCTAGCTGAGAAGCTGGT 238 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| Sbjct 237 GCCGCGAAGCTACCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAACCCATGC 180 >seq2930 Length=1557 Score = 111 bits (122), Expect = 3e-22 Identities = 79/91 (87%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 28 TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTA 87 || |||||| ||||||| |||| || |||||||||| ||||||||||| ||||||| Sbjct 1 TACTTGGTTAATGCGGCTAGCTGAAAAGCTAGTGCCGCGACGCTACCATCTGTTGGATTA 60 Query 88 TGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 || |||||||||||||||||||||||||||| Sbjct 61 TGACTGAACGCCTCTAAGTCAGAATCCATGC 91 >seq2847 Length=33222 Score = 107 bits (118), Expect = 3e-21 Identities = 96/118 (81%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||| | || |||||| ||||||| |||| || ||| Sbjct 32385 GTACGAGAGGAACAGTTGG-TTCACA-TACTTGGTTAATGCGGCTAGCTGAAAAGCTAGT 32442 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 || |||| ||||||||||| ||| ||||| ||||| |||||||||||||||||||||| Sbjct 32443 GCGGCGACGCTACCATCTGTTGGGTTATGACTGAATGCCTCTAAGTCAGAATCCATGC 32500 >seq3239 Length=23045 Score = 96.9 bits (106), Expect = 6e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 58 AGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATG 117 |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 23043 AGTGCCGCGACGCTACCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCATG 22984 Query 118 C 118 | Sbjct 22983 C 22983 >seq721 Length=13719 Score = 96.9 bits (106), Expect = 6e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 58 AGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATG 117 |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 13709 AGTGCCGCGACGCTACCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCATG 13650 Query 118 C 118 | Sbjct 13649 C 13649 >seq367 Length=41285 Score = 77.0 bits (84), Expect = 5e-12 Identities = 64/77 (83%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 21 TTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGC 80 |||||| || |||||| ||||||| |||| || |||||||||| ||||||||||| Sbjct 39076 TTCAGA-TACTTGGTTAATGCGGCTAGCTGAAAAGCTAGTGCCGCGACGCTACCATCTGT 39134 Query 81 TGGATTATGGCTGAACG 97 ||||||||| ||||||| Sbjct 39135 TGGATTATGACTGAACG 39151 >seq3187 Length=81671 Score = 75.2 bits (82), Expect = 2e-11 Identities = 67/84 (80%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 28 TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTA 87 || |||||| || || | |||| || |||||||||| ||||||||||| ||||||| Sbjct 27159 TACTTGGTTAATGAGGTTAGCTGAAAAGCTAGTGCCGCGACGCTACCATCTGGTGGATTA 27100 Query 88 TGGCTGAACGCCTCTAAGTCAGAA 111 || ||| ||||||||| |||||| Sbjct 27099 TGACTGTACGCCTCTACTTCAGAA 27076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819171716096