Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2471 601 1e-169 seq1243 455 1e-125 seq1007 403 5e-110 seq208 100 9e-19 >seq2471 Length=2597 Score = 601 bits (666), Expect = 1e-169 Identities = 442/511 (86%), Gaps = 9/511 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||| || |||||||||| ||||| |||||||||||| Sbjct 1319 GTACTCATTCCAATTACAAGACTTGTAAAAGCCCTGTATTGTTATTTCTTGTCACTACCT 1260 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1259 CCCTGAGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1200 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| Sbjct 1199 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTGCAACCATGGTA 1140 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||| | ||||||||| ||||||||||||||||||||||||||| ||||||| || Sbjct 1139 AGCCACTACCTTACCATCGACAGTTGATAGGGCAGAAATTTGAATGAAACATCGCCAGCG 1080 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCG-----AAGGGCG 295 ||||||| ||||||||| | ||||| ||||||||||||| || || | | || Sbjct 1079 CAAGGCCGTGCGATTCGATCAGTTACTATGAATCACCAAAGACACCGGGCAGAACCCGCA 1020 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGG--GGTTTTTAGCATGTATTA 353 ||||||||| |||||||||| ||| | | ||| ||| || | | || |||||||||| Sbjct 1019 TTGGTTTTTAATCTAATAAACACAGCTCCTCCAAAGAAGGTAGCTCTTGCGCATGTATTA 960 Query 354 GCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGAT 413 || ||||||||||| ||||||||||||| || | || ||||||||||| ||||||| | Sbjct 959 GCCATAGAATTACCATGGTTATCCATGTAAAAATG-ACCATCAAATAAACTATAACTGTT 901 Query 414 TTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTA 473 |||||||||||||||||||||||| ||||| | | |||||||||||||||||||||||| Sbjct 900 TTAATGAGCCATTCGCAGTTTCACCGTATA-AAAGTTTATACTTAGACATGCATGGCTTA 842 Query 474 ATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||| Sbjct 841 ATCTTTGAGACAAGCATATGACTACTGGCAG 811 Score = 100 bits (110), Expect = 9e-19 Identities = 55/55 (100%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 450 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 527 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 473 Score = 100 bits (110), Expect = 9e-19 Identities = 55/55 (100%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 450 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 693 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 639 Score = 93.3 bits (102), Expect = 1e-16 Identities = 51/51 (100%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 454 ACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 763 ACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 713 Score = 75.2 bits (82), Expect = 3e-11 Identities = 41/41 (100%), Gaps = 0/41 (0%) Strand=Plus/Minus Query 452 ATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT 492 ||||||||||||||||||||||||||||||||||||||||| Sbjct 459 ATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT 419 >seq1243 Length=7009 Score = 455 bits (504), Expect = 1e-125 Identities = 357/421 (85%), Gaps = 7/421 (2%) Strand=Plus/Minus Query 89 GCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACC 148 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 7009 GCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACC 6950 Query 149 CTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGAT 208 ||||||||||||||||||| | || ||||||||| || |||||| ||||||| |||| Sbjct 6949 CTAATTCCCCGTTACCCGTCACTGTCACGGTAGGCCAATACCCTACCGTCGAAAGCTGAT 6890 Query 209 AGGGCAGAAATTTGAATGAACCATCGCCGGCTC-AAGGCCA--TGCGATTCGTTAAGTTA 265 ||| |||||| |||||||| ||||||| || | ||||| | |||||| |||| |||| Sbjct 6889 AGGTCAGAAACTTGAATGATCCATCGCGAGCCCGAAGGCAAACTGCGATCCGTTCGGTTA 6830 Query 266 TTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTT 325 |||||||||||||| || | ||| | ||||||||| ||||||||||| ||| | | | Sbjct 6829 CTATGAATCACCAAGACTCCACAAAGTGGGTTGGTTTTGTATCTAATAAACACAGCTCCT 6770 Query 326 CCGAAGTCGG--GGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAG 383 || || || | |||| || ||||||||| ||||||||||| ||||||||||||| Sbjct 6769 CCAGAGAAGGTAGCTTTTGCGCGTGTATTAGCCATAGAATTACCATGGTTATCCATGTAA 6710 Query 384 TAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATA 443 || | || | ||||||||| |||||| ||||||||||||||||||||||||| ||||| Sbjct 6709 AAAAG-ACCACCAAATAAACTATAACTATTTTAATGAGCCATTCGCAGTTTCACCGTATA 6651 Query 444 GATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6650 -AAAGTTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 6592 Query 504 G 504 | Sbjct 6591 G 6591 >seq1007 Length=55227 Score = 403 bits (446), Expect = 5e-110 Identities = 404/523 (77%), Gaps = 46/523 (9%) Strand=Plus/Plus Query 6 CATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCG 65 || ||||||||||| | |||| ||||||||| ||||| | ||||||||||| Sbjct 459 CACTCCAATTACAAAGCATAAAAT-GCCCTGTATTGTTATTTCTCGTCACTACCTCGAAA 517 Query 66 -TGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGG----TAGCCGTT 120 ||| |||||||||||||||| ||||||||||||||| ||||||| |||||||| Sbjct 518 CTGTTTTCATTGGGTAATTTGCGCACCTGCTGCCTTCCTTAGATGTGGGTGGTAGCCGTT 577 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||| Sbjct 578 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTCACTGCCACGGTA 637 Query 181 GGCCACT--------------ATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATG 226 ||||| | ||||||| | ||||| ||||||| |||||| ||||||| Sbjct 638 GGCCATTCCACGGTAGCTTTCCTCCTACCGTGGAAAGCTGATAGGTCAGAAACTTGAATG 697 Query 227 AACCATCGCCGGCTC-AAGGCCA--TGCGATTCGTTAAGTTATTATGAATCACCAAGGAG 283 | ||||||| ||| | || |||| |||||| |||| |||| |||||||||||||| Sbjct 698 ATCCATCGCGGGCCCGAAAGCCAACTGCGATCCGTTCGGTTACTATGAATCACCAAGACT 757 Query 284 CCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGG--GGTTTT 341 || | ||| | ||||||||| ||||||||||| ||| | | ||| || || | | || Sbjct 758 CCACAAAGTGGGTTGGTTTTGTATCTAATAAACACAGCTCCTCCAGAGAAGGTAGCTCTT 817 Query 342 TAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAA 401 |||||||||||| ||||||||||| ||||||||||||| || | || ||||||||| Sbjct 818 GCGCATGTATTAGCCATAGAATTACCATGGTTATCCATGTAAAAAAG-ACCATCAAATAA 876 Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGAC 461 || ||||||| |||||| ||||| | || |||||||||||| Sbjct 877 ACTATAACTG-------------------TTTTCACCGTATA-AATGTTTATACTTAGAC 916 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 917 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 959 >seq208 Length=49930 Score = 100 bits (110), Expect = 9e-19 Identities = 55/55 (100%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 450 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 64 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510346169344