Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06] 10,336 sequences; 60,415,144 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq8452 176 1e-41 seq5499 75.2 2e-11 seq1485 75.2 2e-11 >seq8452 Length=2322 Score = 176 bits (194), Expect = 1e-41 Identities = 127/147 (86%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||||||| | ||| | |||||||||| ||| | | |||||| |||| ||||||| Sbjct 876 ATCTTCACAGACATTTCTATTTCACCGAATCTTTCTCTAAGACAGCATCCAAGTCGTTAC 935 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 936 ACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATA 995 Query 129 GTTACGGCCGCCGTTTACTGGGGCTTA 155 ||||| ||||||||||||||| ||||| Sbjct 996 GTTACAGCCGCCGTTTACTGGAGCTTA 1022 >seq5499 Length=5165 Score = 75.2 bits (82), Expect = 2e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 || |||| || || ||| ||| || ||||| |||||||||||||||||| |||||||| | Sbjct 3899 AAGTCGTCACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATTTTGCTACCTTTG 3958 Query 119 GACCGT 124 |||||| Sbjct 3959 GACCGT 3964 >seq1485 Length=815 Score = 75.2 bits (82), Expect = 2e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 || |||||| || ||| ||| || ||||| |||||||||||||||||| |||||||| | Sbjct 337 AAGTCGTTAAACCATTCATGCAGGACGGAATTTACCCGACAAGGAATTTTGCTACCTTTG 278 Query 119 GACCGT 124 |||||| Sbjct 277 GACCGT 272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062290190336