Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06] 10,336 sequences; 60,415,144 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq8452 188 1e-45 >seq8452 Length=2322 Score = 188 bits (208), Expect = 1e-45 Identities = 144/168 (86%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 109 GGTCCTCTCGTACTAAG-GACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGA 167 |||||||||||||||| || | | | |||| ||| || | | || |||||| ||| Sbjct 258 GGTCCTCTCGTACTAAAAGAAAAATTTT-TCAATGTTCTTATGTCTACACCGGATATGGA 316 Query 168 CCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCC 227 |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||| | Sbjct 317 CCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTGCCGCTTTAATGGGCGAACAGAC 376 Query 228 CAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||||||||| |||||||||||||| ||||||| ||||||||||||||| Sbjct 377 CAACCCTTGAGACCTACTTCAGCCTCAGGATGCGACGAGCCGACATCG 424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780721818496