Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06]
10,336 sequences; 60,415,144 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq8452 141 3e-31
seq5499 84.2 7e-14
seq1485 84.2 7e-14
>seq8452
Length=2322
Score = 141 bits (156), Expect = 3e-31
Identities = 108/128 (84%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGG 410
||||||||| || | | |||||||| ||||||||| || ||||||||||||||
Sbjct 894 ATTTCACCGAATCTTTCTCTAAGACAGCATCCAAGTCGTTACACCTTTCGTGCAGGTCGG 953
Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470
|||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||
Sbjct 954 AACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATAGTTACAGCCGCCGTTTAC 1013
Query 471 TGGGGCTT 478
||| ||||
Sbjct 1014 TGGAGCTT 1021
>seq5499
Length=5165
Score = 84.2 bits (92), Expect = 7e-14
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430
|||||| ||| |||||| || |||||| |||||| ||||| |||||||||||||||||
Sbjct 3887 GAGACATTAGGAAAGTCGTCACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATT 3946
Query 431 TCGCTACCTTAGGA 444
| |||||||| |||
Sbjct 3947 TTGCTACCTTTGGA 3960
>seq1485
Length=815
Score = 84.2 bits (92), Expect = 7e-14
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430
|||||| ||| |||||||| |||||| |||||| ||||| |||||||||||||||||
Sbjct 349 GAGACATTAGGAAAGTCGTTAAACCATTCATGCAGGACGGAATTTACCCGACAAGGAATT 290
Query 431 TCGCTACCTTAGGA 444
| |||||||| |||
Sbjct 289 TTGCTACCTTTGGA 276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1702224039936
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |