Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06] 10,336 sequences; 60,415,144 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3981 104 2e-17 >seq3981 Length=8532 Score = 104 bits (114), Expect = 2e-17 Identities = 122/165 (74%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 65084 GTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGG 65143 ||||| | || |||| |||||| || | ||||||| ||| |||||||| ||||| | | Sbjct 508 GTGAATTTAATTGCATCAGCAGCAGCTTGCGTCCTAAAATAATACATGCCTGTCTTTAAG 567 Query 65144 CCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCGGCCACA 65203 || ||||||| ||||||||||||||| ||||| ||| || || | || || | Sbjct 568 CCTCCACGCCATCCATAGAAATGCATCGTTGATAGTTTAGCGTATGTGGGTGTATTCATA 627 Query 65204 TGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCT 65248 | ||||| | |||||||||||||| || ||| || | | |||| Sbjct 628 TATATATTAAGAGACTGACTCTGATCTATATAAGGAGCTCTATCT 672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397517918359040