Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20necatrix_20[genbank_20GCA_5F000499385.1_202013-11-06] 3,707 sequences; 55,007,932 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq436 196 2e-47 seq85 87.8 7e-15 >seq436 Length=1525 Score = 196 bits (216), Expect = 2e-47 Identities = 238/318 (75%), Gaps = 21/318 (7%) Strand=Plus/Plus Query 382 GATGCTGGCGT-AATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440 ||||||| | | || |||| || || ||||||||| ||||||||||||||||||||||| Sbjct 135 GATGCTGTCCTTAACGGTTTCAACCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACA 194 Query 441 TCTATGCGAGTGTTTGGGTGTCA-AACCCGTGC--GCGTAATGAAAGTGAACGGAGGTGG 497 | | ||||||| | ||| || ||||| || || ||||||||||| | ||| | Sbjct 195 TATGTGCGAGTATGCGGG---CAGAACCCCTGTATGCACAATGAAAGTGAGAGTAGG-GA 250 Query 498 GAACCCGTG----------AGGGT--GCACCATCGACCGATCCTGATGTCTTCGGATGGA 545 || || ||| ||||| ||||||| | || | | || || Sbjct 251 GAGGTTTTGTTTTTTTGGCAGGCCTCGCACCTACGACCGACCACGAGCTTTGCGAGAGG- 309 Query 546 TTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605 ||||||| |||| | ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 310 TTTGAGTTGTAGCACATCTGTTAGGACCCGAAAGATGGTGAACTATGCCTGAGTAGGGTG 369 Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665 ||| ||| |||| ||| |||||||||| |||| | ||| ||||||||||| ||||||| Sbjct 370 AAGTCAGGCGAAAGCCTGATGGAGGCTCGTAGCGATACTGACGTGCAAATCGTTCGTCAA 429 Query 666 ATTTGGGTATAGGGGCGA 683 | |||||||||||||||| Sbjct 430 ACTTGGGTATAGGGGCGA 447 >seq85 Length=83309 Score = 87.8 bits (96), Expect = 7e-15 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 90 AAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAG 149 ||||||||||||||| |||||||| || | ||||||| |||| ||||||||||||| Sbjct 61904 AAAGCTAAATATTGGAGTGAGACCGAAAGTGAACAAGTACTGTGAAGGAAAGATGAAAAG 61963 Query 150 CACTTTGGAAAGAGAG 165 ||||||||||||||| Sbjct 61964 GACTTTGGAAAGAGAG 61979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079920484850