Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20necatrix_20[genbank_20GCA_5F000499385.1_202013-11-06] 3,707 sequences; 55,007,932 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq222 152 1e-34 >seq222 Length=5187 Score = 152 bits (168), Expect = 1e-34 Identities = 194/265 (73%), Gaps = 4/265 (2%) Strand=Plus/Minus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||||||||| ||||| ||||| | || ||| ||||||| | ||||||| Sbjct 3834 ATCTTCACAGACATTTCTATTTCGCCGAATCTTTTTCCAAGACAGCATCCAAGTCGTTAC 3775 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 3774 ACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATA 3715 Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATCAA 194 ||||| |||||||||||| || |||| || || | || ||| ||| | Sbjct 3714 GTTACAGCCGCCGTTTACTGGAGCTT--ATAAAAATATTTTAATTA--TAAATATCTTTT 3659 Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254 ||||| | || |||| ||||||| |||| ||| ||| | || || || ||| Sbjct 3658 TTAACTTACCAGCACTGGGCAGGTGTCAGCCCCCTTACATTGTAATTACACTTAGCGGAG 3599 Query 255 TGCTGTGTTTTTAATAAACAGTCGC 279 ||||||||| |||||||||||| Sbjct 3598 ACTTGTGTTTTTGATAAACAGTCGC 3574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260753262144