Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20necatrix_20[genbank_20GCA_5F000499385.1_202013-11-06] 3,707 sequences; 55,007,932 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq222 235 1e-59 >seq222 Length=5187 Score = 235 bits (260), Expect = 1e-59 Identities = 268/354 (76%), Gaps = 12/354 (3%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||||||| | ||| | ||||| |||| ||| || |||||| |||| ||||||| Sbjct 3834 ATCTTCACAGACATTTCTATTTCGCCGAATCTTTTTCCAAGACAGCATCCAAGTCGTTAC 3775 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 3774 ACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATA 3715 Query 129 GTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATC-CC 187 ||||| ||||||||||||||| |||| | | | || || | ||| | ||| Sbjct 3714 GTTACAGCCGCCGTTTACTGGAGCTT-ATAAAAATATTTTAAT---TATAA-ATATCTTT 3660 Query 188 CTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGA 247 ||||| | ||||||| ||||||| |||||| || ||||| || | ||||||| || Sbjct 3659 TTTAACTTACCAGCACTGGGCAGGTGTCAGCCCCCTTACATTGTAATTACACTTAGCGGA 3600 Query 248 AACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGACAGG 307 || |||||||||| ||||||||||||||| || || ||| | | | | | | Sbjct 3599 GACTTGTGTTTTTGATAAACAGTCGCTTGGATCTCTTTATTGCAGTC---CTTTG---GA 3546 Query 308 CACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTT 361 || || || | || ||||||| || | |||||||||||||||||| || |||| Sbjct 3545 CATCCTTTTTTCCGAAGTTACAGGATTATTTTGCCGAGTTCCTTAGAAAAAGTT 3492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062360616832