Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20necatrix_20[genbank_20GCA_5F000499385.1_202013-11-06] 3,707 sequences; 55,007,932 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq998 233 3e-59 seq479 111 3e-22 >seq998 Length=8601 Score = 233 bits (258), Expect = 3e-59 Identities = 178/207 (86%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 2918 TCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 2977 Query 76 AAACTTCCATTGGCTGGA-AGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCAT--AG 132 |||||||| | | | || | ||| ||||||||||||||| | || |||| || Sbjct 2978 AAACTTCCTTGCGTTAGACATGCAA-AGTCCCTCTAAGAAGTGATACAGTAACCGCGAAG 3036 Query 133 TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATC 192 | || |||||||||||| |||||||||||||||||||| ||||||||||||| ||| Sbjct 3037 TTACTGACCCTATTTAGCAGGCTAAGGTCTCGTTCGTTATCGAAATTAACCAGACAGATC 3096 Query 193 ACTCCACCAACTAAGAACGGCCATGCA 219 ||||||||||||||||||||||||||| Sbjct 3097 ACTCCACCAACTAAGAACGGCCATGCA 3123 >seq479 Length=267577 Score = 111 bits (122), Expect = 3e-22 Identities = 66/69 (96%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 240756 TCAGTGTTGGGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 240815 Query 76 AAACTTCCA 84 ||||||||| Sbjct 240816 AAACTTCCA 240824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796771385667