Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20necatrix_20[genbank_20GCA_5F000499385.1_202013-11-06] 3,707 sequences; 55,007,932 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq3553 87.8 2e-15 >seq3553 Length=117791 Score = 87.8 bits (96), Expect = 2e-15 Identities = 87/109 (80%), Gaps = 3/109 (3%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC- 64 |||||||||||||||||| |||| |||||||| ||||||||||| | |||||| Sbjct 109435 CTAGAAACCAACAAAATA-GGACTGACGTCCTACCTCATTATTCCATGTTGCAGTATTCA 109493 Query 65 GGGC-GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCC 112 |||| |||||||||| |||||| || |||||||| |||||| ||| Sbjct 109494 GGGCAACAAGCCTGCTTGCAACACTATATTTTTCTCAGAGTAAAATTCC 109542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595178625438