Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20necatrix_20[genbank_20GCA_5F000499385.1_202013-11-06] 3,707 sequences; 55,007,932 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq222 187 4e-45 >seq222 Length=5187 Score = 187 bits (206), Expect = 4e-45 Identities = 144/169 (85%), Gaps = 4/169 (2%) Strand=Plus/Minus Query 109 GGTCCTCTCGTACTAA--GGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGG 166 |||||||||||||||| | | | ||| || || ||| || | || |||||| || Sbjct 4453 GGTCCTCTCGTACTAAAAGAAAAACTCTTC--AATGTTCTTATGTATACACCGGATATGG 4396 Query 167 ACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGC 226 ||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||| Sbjct 4395 ACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTGCCGCTTTAATGGGCGAACAGA 4336 Query 227 CCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||||| |||||||||||||| ||||||| ||||||||||||||| Sbjct 4335 CCAACCCTTGAGACCTACTTCAGCCTCAGGATGCGACGAGCCGACATCG 4287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780771960252