Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20necatrix_20[genbank_20GCA_5F000499385.1_202013-11-06] 3,707 sequences; 55,007,932 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq620 93.3 3e-14 >seq620 Length=258453 Score = 93.3 bits (102), Expect = 3e-14 Identities = 112/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073 || || | |||||| ||||| | ||| ||||| ||| ||| || | |||| |||| Sbjct 181399 GAAGCCAAGTTGCACACAGCCACCTCCTCAGGGCTGGTGAACTGCACCACTTCGCAGCAC 181340 Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTT-GCGATTGCATGCATC 66132 | || |||| ||| | ||||||| | ||| || || ||||| ||| ||||| || || Sbjct 181339 AAGTTGCTGCTGCGCAAAGTGCCCAGGTGCTGCTGGTTGCTCTTCGCG-TTGCACGCGTC 181281 Query 66133 CTTGTACATCATGTACGGAGTGCCGGTCTC 66162 |||||||| ||||||||||||||| || || Sbjct 181280 CTTGTACAACATGTACGGAGTGCCCGTTTC 181251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397550038250480