Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1656 277 3e-72 seq10114 96.9 5e-18 seq19468 75.2 2e-11 >seq1656 Length=2684 Score = 277 bits (306), Expect = 3e-72 Identities = 203/232 (88%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || ||| |||| | ||||| |||| ||||||| ||| | Sbjct 2495 GTACAAAGGGCAGGGACGTAATCGGCGCAAGCT-GCTGACTTGCGCCTACTAGGCATT-C 2438 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 ||||||||||| || ||||||||| ||||||||||||||||||| | ||||| |||| Sbjct 2437 CTCGTTGAAGATTAATAATTGCAATAATCTATCCCCATCACGATGCATACTCAAAAGATT 2378 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| |||||| |||||||||| | | |||||||| || |||||||||||||||||||| Sbjct 2377 ACCTAGACCTGCCGGCCAAGGTTAAAAACTCGTTGCATGCATCAGTGTAGCGCGCGTGCA 2318 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 2317 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTG 2266 >seq10114 Length=12989 Score = 96.9 bits (106), Expect = 5e-18 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 133 GGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCT 192 ||||||||| | | |||||||| || ||||||||||| |||||||| ||||| ||||||| Sbjct 6198 GGCCAAGGTTAAAAACTCGTTGGATTCATCAGTGTAGTGCGCGTGCAGCCCATAACATCT 6139 Query 193 AAGGGCATCACAGACCTGTTATT 215 || | |||| ||||| ||||||| Sbjct 6138 AAAGTCATCCCAGACTTGTTATT 6116 >seq19468 Length=221 Score = 75.2 bits (82), Expect = 2e-11 Identities = 63/76 (83%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 133 GGCCAAGGTGATAGA-CTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATC 191 ||||||||| | | | ||||||| || ||||||||||| |||||||| |||| |||||| Sbjct 146 GGCCAAGGTTAAAAAGCTCGTTGGATTCATCAGTGTAGTGCGCGTGCAGCCCGTAACATC 205 Query 192 TAAGGGCATCACAGAC 207 ||| | |||| ||||| Sbjct 206 TAAAGTCATCCCAGAC 221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751758531390