Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq10385 150 5e-34 seq21034 102 2e-19 >seq10385 Length=4182 Score = 150 bits (166), Expect = 5e-34 Identities = 121/146 (83%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||||||||| ||||| ||||||| || ||| ||||||| | ||||||| Sbjct 925 ATCTTCACAGACATTTCTATTTCACCGAATCTTTCTCAAAGACAGCATCCAAGTCGTTAC 984 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 985 ACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATA 1044 Query 135 GTTACGGCCGCCGTTTACCGGGGCTT 160 ||||| |||||||||||| || |||| Sbjct 1045 GTTACAGCCGCCGTTTACTGGAGCTT 1070 >seq21034 Length=6209 Score = 102 bits (112), Expect = 2e-19 Identities = 75/86 (87%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| |||||| |||||| ||||| |||||||||||||||||| |||||||| |||| Sbjct 4125 TCGTTACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATTTTGCTACCTTTGGAC 4066 Query 128 CGTTATTGTTACGGCCGCCGTTTACC 153 ||| | |||| ||||||||||||| Sbjct 4065 CGTCA-GATTACAGCCGCCGTTTACC 4041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260382095232