Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq32006 152 2e-34 seq10385 143 8e-32 seq684 75.2 3e-11 >seq32006 Length=803 Score = 152 bits (168), Expect = 2e-34 Identities = 160/208 (77%), Gaps = 7/208 (3%) Strand=Plus/Minus Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215 ||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 777 ACAGGAGGTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 718 Query 216 GAGCGCAACCCTTAAGCTTAGTT-GCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCG 274 ||||| | |||||| |||| | ||| |||| || || || || | || Sbjct 717 GAGCGTAGCCCTTATTTAAAGTTAACTATCTTTAAAAACTGC-CTATATTTTTAATG--- 662 Query 275 GTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGC 334 | || ||||||||| ||| ||||||| ||||||||||| ||||| | ||||| Sbjct 661 --AAAAATAAGGAGGAAGGAATGGAAAACGTCAAGTCATCATGCCCTTTATGCTCTGGGC 604 Query 335 TACACACGTGCTACAATGGACAATACAA 362 || ||||||||||||||||| ||||| Sbjct 603 TATACACGTGCTACAATGGATGGTACAA 576 >seq10385 Length=4182 Score = 143 bits (158), Expect = 8e-32 Identities = 96/107 (90%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| | | ||||||||||||||||| Sbjct 4037 TACGCTCGCAAGAGTGAAACTCAAAGGAATTGACGGGGGCTCTCACAAGCGGTGGAGCAT 4096 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT 107 |||||||||||||| ||||||||||||||||||||| | ||||| || Sbjct 4097 GTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGAGCTTGAAAT 4143 >seq684 Length=5136 Score = 75.2 bits (82), Expect = 3e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 17 AAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAG 76 ||||||||||||||||||||| | | |||||||||||||||||||| || |||||| | Sbjct 304 AAACTCAAAGGAATTGACGGG--CTCTTACAAGCGGTGGAGCATGTGGCTTCATTCGATG 247 Query 77 CAA 79 ||| Sbjct 246 CAA 244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503501484160