Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1656 304 2e-80 >seq1656 Length=2684 Score = 304 bits (336), Expect = 2e-80 Identities = 224/260 (86%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 2350 ACTCGTTGCATGCATCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGA 2291 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | | | || | | ||||||||||||||| | | Sbjct 2290 CCTGTTATTGCCTCAAACTTCCTTGCGTTAGACACGCAAAGTCCCTCTAAGAAGTGATGC 2231 Query 122 ACCAACCATAGT---CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 |||| || |||| |||||||||||| |||||||||||||||||||| ||| Sbjct 2230 GGAAACCGAGGTTCCCGATC---CTATTTAGCAGGCTAAGGTCTCGTTCGTTATCGAAAT 2174 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2173 TAACCAGACAGATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 2114 Query 239 GAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||| Sbjct 2113 GAAAGAGCTATCAATCTGTC 2094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796544146026