Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq10385 78.8 2e-12 >seq10385 Length=4182 Score = 78.8 bits (86), Expect = 2e-12 Identities = 150/220 (68%), Gaps = 12/220 (5%) Strand=Plus/Minus Query 127 GGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTC 186 || ||||||||||||||||| |||||| ||| || |||||||| | ||||| | || Sbjct 766 GGTAGTTTGACTGGGGCGGTAGCCTCCTAAAAAGCAACGGAGGTGTACAAAGGT---CTT 710 Query 187 AGCTTGGATGGAAACCATGCGC-------ACAGTGCAAAGGCAAAAGGGTGTTTGACTGC 239 || | ||| || | | | ||||| |||| || |||| ||| Sbjct 709 TTTTTAATTTAAAATAATTGTTTAAATTAAAATTATAAAGGAAAAAAGGC--TTGATTGC 652 Query 240 GACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGG 299 | | | | || |||| ||||||||||||| |||||||||||| | || || || Sbjct 651 AAGAGTTACTACTCGAGCAAGGACGAAAGTCGGTCTTAATGATCCGACAGTTCTTTGTGT 592 Query 300 AACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || ||| |||||| ||| ||||||| ||| || |||||| Sbjct 591 AAAGGCTGTCGCTTAACGAATAAAAGTTACTCTAGGGATA 552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982074373696