Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq10385 102 9e-20 seq21034 84.2 2e-14 >seq10385 Length=4182 Score = 102 bits (112), Expect = 9e-20 Identities = 59/61 (97%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 982 TACACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTT 1041 Query 173 A 173 | Sbjct 1042 A 1042 >seq21034 Length=6209 Score = 84.2 bits (92), Expect = 2e-14 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 171 |||||||||| |||||| ||||| |||||||||||||||||| |||||||| ||||||| Sbjct 4121 TACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATTTTGCTACCTTTGGACCGT 4063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547024293054