Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1656 280 3e-73 >seq1656 Length=2684 Score = 280 bits (310), Expect = 3e-73 Identities = 254/315 (81%), Gaps = 11/315 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGC--CAGG---CCCGCTTTGGCGGGTCGCCGGCTT 74 || |||||||||| |||||||||||| | || | || ||| || || | || Sbjct 2185 GAACGAGACCTTAGCCTGCTAAATAGGATCGGGAACCTCGGTTTC-CGCATCAC----TT 2239 Query 75 CTTAGAGGGACTAT-CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATG 133 |||||||||||| | || || | | | ||||||||||||||||||||||||||||||| Sbjct 2240 CTTAGAGGGACTTTGCGTGTCTAACGCAAGGAAGTTTGAGGCAATAACAGGTCTGTGATG 2299 Query 134 CCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCT 193 |||||||||||||||||| |||||||||||||||||| | ||||||||| | |||| Sbjct 2300 CCCTTAGATGTTCTGGGCTGCACGCGCGCTACACTGATGCATGCAACGAGTTTTTAACCT 2359 Query 194 TGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAA 253 ||||||| |||||| ||||||||| | | | ||||| |||||||||| ||||||| Sbjct 2360 TGGCCGGCAGGTCTAGGTAATCTTTTGAGTATGCATCGTGATGGGGATAGATTATTGCAA 2419 Query 254 TTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACG 313 ||||| ||||||||||||||||||||||| |||| |||| |||| ||| ||||||| Sbjct 2420 TTATTAATCTTCAACGAGGAATGCCTAGTAGGCGCAAGTCAGCAGCTTGCGCCGATTACG 2479 Query 314 TCCCTGCCCTTTGTA 328 ||||||||||||||| Sbjct 2480 TCCCTGCCCTTTGTA 2494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946886041088