Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq21635 125 1e-26 seq83 75.2 2e-11 >seq21635 Length=3261 Score = 125 bits (138), Expect = 1e-26 Identities = 100/118 (85%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| || |||||| ||||||| |||| || ||| Sbjct 3130 GTACGAGAGGAACAGTTGG-TTCAGA-TACTTGGTTAATGCGGCTAGCTGAAAAGCTAGT 3187 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 3188 GCCGCGACGCTACCATCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGC 3245 >seq83 Length=18960 Score = 75.2 bits (82), Expect = 2e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 58 AGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATG 117 |||||||||| |||||| || ||||||||| |||||||| || ||||||||||||||| Sbjct 16106 AGTGCCGCGATATTACCATATGTTGGATTATGACTGAACGCTTCAAAGTCAGAATCCATG 16165 Query 118 C 118 | Sbjct 16166 C 16166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818936953344