Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq20093 264 2e-68 >seq20093 Length=1701 Score = 264 bits (292), Expect = 2e-68 Identities = 201/232 (87%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||| |||||||||||||||| ||| |||| | ||||| |||| ||||||| ||| | Sbjct 279 GTACAAGGGGCAGGGACGTAGTCGGCGCAAGCT-GCTGACTTGCGCCTACTAGGCATT-C 336 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||||||||| || ||||||||| ||||||||||||||||||| | ||| |||||| Sbjct 337 CTCGTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGATGCACCCTCACAAGATT 396 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | || |||| |||||| | | |||||||| || |||||||||||||||||||| Sbjct 397 ACCCAGCCCCATCGGGCAAGGTAAAA-ACTCGTTGCATGCATCAGTGTAGCGCGCGTGCA 455 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 456 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCGAACTTCCTTG 507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751844479820