Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq20093 241 2e-61 >seq20093 Length=1701 Score = 241 bits (266), Expect = 2e-61 Identities = 204/248 (82%), Gaps = 9/248 (4%) Strand=Plus/Minus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 ||||||||||||| |||| ||||||||| | | ||| |||||| ||||| Sbjct 1230 ACTTTTACTTTGAGAAAAATAGAGTGTTTNTTGTCGCCCT------GAATACTGCAGCAT 1177 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||||| ||||||| | |||||||||||||||||||||||||||| |||||||| Sbjct 1176 GGAATAATAAGATAGGACCT-CGGTTCTATTTTGTTGGTTTCTAGGACCAAGGTAATGAT 1118 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||| ||| ||||| | ||||| || ||||||||||||||||||| ||||| | Sbjct 1117 TAATAGGGACAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATTTGT 1058 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 | ||||| ||||||||||||||| || |||||||||||||||||||||| |||||| | Sbjct 1057 TAAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGACA 999 Query 311 GTTAGGGG 318 | |||||| Sbjct 998 G-TAGGGG 992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915004623104