Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq6921 158 5e-36 seq1714 93.3 2e-16 seq1174 78.8 4e-12 >seq6921 Length=58070 Score = 158 bits (174), Expect = 5e-36 Identities = 209/286 (73%), Gaps = 12/286 (4%) Strand=Plus/Plus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467 ||||||||| |||| |||||||||||||||| | | |||| || | ||| | | || Sbjct 57776 CCCGTCTTGAAACATAGACCAAGGAGTCTAACGTATGTGCGCGTATGCGGGCGGAAGCCC 57835 Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGT-GCA------CCATC- 519 || || ||||||||||| | ||| | || || | ||| ||||| Sbjct 57836 TGTATGCACAATGAAAGTGAGAGTAGG-GAGAGGTTTTGCTTTTTGCAGCCCTCCCATCT 57894 Query 520 --GACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 |||||| | ||| | || ||| | ||||||| |||| | ||||| |||| |||| Sbjct 57895 ACGACCGACCATGAACT-TTGGGAGAGGTTTGAGTTGTAGCACATCTGTTAGGACACGAA 57953 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 ||||||||||||| | ||| |||||||||| ||| |||| ||| |||| ||||| || Sbjct 57954 AGATGGTGAACTACGGCTGCGTAGGGTGAAGTCAGGCGAAAGACTGATGGAAGCTCGTAG 58013 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || | ||| ||||||||||| |||||||| |||||||||||||||| Sbjct 58014 CGATACTGACGTGCAAATCGTTCGTCAAACTTGGGTATAGGGGCGA 58059 Score = 98.7 bits (108), Expect = 4e-18 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| ||| |||||| | ||| | ||| | | | ||| | | ||||||||||| Sbjct 57320 GAGTCGCGTTCGTTGGGATTTGAGCGCAAAACGTGTGATAAGCTCCACATAAAGCTAAAT 57379 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 |||||| |||||| |||||| ||||||| | | ||||||||||||| |||||||| Sbjct 57380 ATTGGCATGAGACCCATAGCGAACAAGTACTGAAAAGGAAAGATGAAAAGGGCTTTGGAA 57439 Query 160 AGAGAGTTAAAA 171 ||| |||||||| Sbjct 57440 AGAAAGTTAAAA 57451 >seq1714 Length=39459 Score = 93.3 bits (102), Expect = 2e-16 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 ||||||||||||||||| || || ||||||| | ||| ||| |||| ||||| || Sbjct 1700 AGATGGTGAACTATGCCGGAGTACGGTGAAGTGGGGCAAAAGCCTGATGGAAGCTCGTAG 1641 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || | ||| ||||||||| | | |||||| |||||||||| ||||| Sbjct 1640 CGATACTGACGTGCAAATGGTTGGTCAAACTTGGGTATAGCGGCGA 1595 >seq1174 Length=613 Score = 78.8 bits (86), Expect = 4e-12 Identities = 55/63 (87%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 621 CTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 ||| |||| ||||| |||| | ||| ||||||||||| |||||||| ||||||||||||| Sbjct 1 CTGATGGAAGCTCGTAGCGATACTGACGTGCAAATCGTTCGTCAAACTTGGGTATAGGGG 60 Query 681 CGA 683 ||| Sbjct 61 CGA 63 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079542085400