Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq5449 150 5e-34 seq2850 102 2e-19 seq20722 75.2 3e-11 >seq5449 Length=2664 Score = 150 bits (166), Expect = 5e-34 Identities = 121/146 (83%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||||||||| ||||| ||||||| || ||| ||||||| | ||||||| Sbjct 1697 ATCTTCACAGACATTTCTATTTCACCGAATCTTTCTCCAAGACAGCATCCAAGTCGTTAC 1638 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1637 ACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATA 1578 Query 135 GTTACGGCCGCCGTTTACCGGGGCTT 160 ||||| |||||||||||| || |||| Sbjct 1577 GTTACAGCCGCCGTTTACTGGAGCTT 1552 >seq2850 Length=5711 Score = 102 bits (112), Expect = 2e-19 Identities = 75/86 (87%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| |||||| |||||| ||||| |||||||||||||||||| |||||||| |||| Sbjct 332 TCGTTACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATTTTGCTACCTTTGGAC 391 Query 128 CGTTATTGTTACGGCCGCCGTTTACC 153 ||| | |||| ||||||||||||| Sbjct 392 CGTCA-AATTACAGCCGCCGTTTACC 416 >seq20722 Length=1135 Score = 75.2 bits (82), Expect = 3e-11 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGC 116 |||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 778 TCGTTATACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGC 730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260530844416