Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08]
21,348 sequences; 60,083,328 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq5449 170 4e-40
seq2850 96.9 7e-18
seq20722 80.6 6e-13
>seq5449
Length=2664
Score = 170 bits (188), Expect = 4e-40
Identities = 126/147 (86%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68
|||||||| | ||| | |||||||||| ||| | |||||| |||| |||||||
Sbjct 1697 ATCTTCACAGACATTTCTATTTCACCGAATCTTTCTCCAAGACAGCATCCAAGTCGTTAC 1638
Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128
|||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1637 ACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATA 1578
Query 129 GTTACGGCCGCCGTTTACTGGGGCTTA 155
||||| ||||||||||||||| |||||
Sbjct 1577 GTTACAGCCGCCGTTTACTGGAGCTTA 1551
>seq2850
Length=5711
Score = 96.9 bits (106), Expect = 7e-18
Identities = 75/88 (85%), Gaps = 1/88 (1%)
Strand=Plus/Plus
Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118
|| ||||||| || ||| ||| || ||||| |||||||||||||||||| |||||||| |
Sbjct 329 AAGTCGTTACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATTTTGCTACCTTTG 388
Query 119 GACCGTTATAGTTACGGCCGCCGTTTAC 146
|||||| | | |||| ||||||||||||
Sbjct 389 GACCGTCA-AATTACAGCCGCCGTTTAC 415
>seq20722
Length=1135
Score = 80.6 bits (88), Expect = 6e-13
Identities = 50/54 (93%), Gaps = 0/54 (0%)
Strand=Plus/Minus
Query 57 CCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGC 110
|||| |||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct 783 CCAAGTCGTTATACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGC 730
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062173198848
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |