Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq19519 217 4e-54 seq2918 86.0 2e-14 >seq19519 Length=3877 Score = 217 bits (240), Expect = 4e-54 Identities = 273/366 (75%), Gaps = 19/366 (5%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 886 TACGCTCGCAAGAGTGAAACTCAAAGGAATTGACGGGGGCTCGCACAAGCGGTGGAGCAT 827 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| | ||||||||||||||||||| | ||||| || | || | Sbjct 826 GTGGTTTAATTCGATGTAACGCGAAGAACCTTACCAGAGCTTGAAAT-ATATG---TTTT 771 Query 121 TAGAGAT---AGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGT 177 || | | | | ||| || ||| | ||||| | ||||||| |||||| Sbjct 770 TAAAATTTTAATAAATTT---ATTATAATTACAAA--TACAGGAGGTGCATGGCTGTCGT 716 Query 178 CAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGT 237 ||||||||||||||||||||||||||||||||||||||||||| | |||||| ||| Sbjct 715 CAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGTAGCCCTTATTTAAAGT 656 Query 238 T-GCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGG 296 | ||| |||| || || || || || | | || ||||||||| Sbjct 655 TAAATATCTTTAAAAACTGC-CTATATTTT---TG--TATAAAAATAAGGAGGAAGGAAT 602 Query 297 GGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACA 356 ||| ||||||| || |||||||| ||||| | ||||||| ||||||||||||||||| Sbjct 601 GGAAAACGTCAAGTCCTCATGCCCTTTATGCTCTGGGCTATACACGTGCTACAATGGATG 542 Query 357 ATACAA 362 ||||| Sbjct 541 GTACAA 536 >seq2918 Length=27233 Score = 86.0 bits (94), Expect = 2e-14 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||||||||||||||| ||| | ||| || || ||||||||| |||| Sbjct 14978 CGCAAGCGTGAAACTCAAAGGAATTGGCGGAGGATGGCATAAACGATGGAGCATGCGGTT 14919 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTG 103 ||| |||| | | | ||||||||| ||||| | |||| Sbjct 14918 TAACTCGATGTAGCACGAAGAACCCTACCAGAGCTTG 14882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503678926080