Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2667 248 1e-63 seq5626 244 2e-62 seq13820 179 6e-43 seq1952 170 3e-40 seq4080 95.1 2e-17 seq5449 82.4 1e-13 >seq2667 Length=93536 Score = 248 bits (274), Expect = 1e-63 Identities = 213/262 (81%), Gaps = 1/262 (0%) Strand=Plus/Minus Query 34 TCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTA 93 ||||| ||||| |||||||||||| | ||||||||||| || |||||||||||||||| Sbjct 19187 TCAGTTTGGTAATACTAACCTGTCTTACGACGGTCTAAAACCCGCTCACGTTCCCTATTG 19128 Query 94 GTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACAT 153 | ||||||||||||| |||||| ||||| ||| || |||||| || | ||||||| Sbjct 19127 GCGGGTGAACAATCCGACGCTTTGAGAATTTTGCGTCTCAATGATAACAAAAACCGACAT 19068 Query 154 CGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTG 213 ||||||||| ||| |||||| | |||||||| |||| || ||||||||||||| |||| Sbjct 19067 CGAAGGATCTAAAGGCAACGGCTCTATGAACACTTGACTCCCACAAGCCAGTTCCCCCTT 19008 Query 214 TGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGATAGGCC 272 |||||| ||||||| |||||||||| || |||| || ||| | |||||||||||| Sbjct 19007 TGGTAATTTTTCTGACACCTCTAGCTGAAATTTTCTCTCGATCTAGATGATCGATAGGCC 18948 Query 273 ACACTTTCATGGTTTGTATTCA 294 || ||| || ||||||||||| Sbjct 18947 ACGCTTCCACAGTTTGTATTCA 18926 >seq5626 Length=2554 Score = 244 bits (270), Expect = 2e-62 Identities = 170/193 (88%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 76 AGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTAT 135 ||||||||||||||||| ||||||||||||||| || ||| || |||||| || || Sbjct 193 AGCTCACGTTCCCTATTGGTGGGTGAACAATCCGACACTTTGAGACTTCTGCGTCTCAAT 134 Query 136 GATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCC 195 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct 133 GATAGGAAGAGCCGGCATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGAC 74 Query 196 ACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGAC 255 |||||||||||||||||||||||||||||||| |||||||||| || |||| | | Sbjct 73 ACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTGAAAGTTTCTCAGACC 14 Query 256 TAAAGGATCGATA 268 ||||||||||||| Sbjct 13 TAAAGGATCGATA 1 >seq13820 Length=300 Score = 179 bits (198), Expect = 6e-43 Identities = 128/147 (87%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 147 CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 241 Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 || ||||||||||| |||||| |||||||| | || ||| | |||||||||||| Sbjct 240 ATACCTGTGGTAACCTTTCTGCCACCTCTAACTGAAAGCTTCTCAGACCTAAAGGATCGA 181 Query 267 TAGGCCACACTTTCATGGTTTGTATTC 293 |||| || |||||| |||||||||| Sbjct 180 TAGGTCATGCTTTCACAGTTTGTATTC 154 >seq1952 Length=35457 Score = 170 bits (188), Expect = 3e-40 Identities = 199/267 (75%), Gaps = 9/267 (3%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||||||||||||||| ||| | || |||||||||||| ||| ||| ||||||| Sbjct 11199 ATCAGTAGGGTAAAACTAACCTCTCTTACGAAGGTCTAAACCCATCTCGCGTACCCTATT 11258 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 ||||||||| ||||| |||||| || || | || ||||||||||||| |||| Sbjct 11259 GGTGGGTGAAAAATCCGACGCTTCGAGACGCCTTCATCCCATTGATAGGAAGAGCTGACA 11318 Query 153 TCGAAGGATCAAA----AA----GCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAG 204 ||||||||||||| || | || |||||| | ||| ||| | | |||| |||| Sbjct 11319 TCGAAGGATCAAAGCACAACGTCGAAAAGTCGCTGTAAACACTTTAATTCGACAAACCAG 11378 Query 205 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT-CAAATTTCGAGGGACTAAAGGAT 263 |||| ||||||||| |||||| | | | ||| || ||| | |||||| || Sbjct 11379 TTATTCCTGTGGTAGCTTTTCCCATAGTTTTTACCTGGAAGCTTCTCACGCCTAAAGAAT 11438 Query 264 CGATAGGCCACACTTTCATGGTTTGTA 290 ||||||||| |||||| ||||||| Sbjct 11439 CGATAGGCCGTGCTTTCACAGTTTGTA 11465 >seq4080 Length=3875 Score = 95.1 bits (104), Expect = 2e-17 Identities = 57/60 (95%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct 2559 ATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCAAGCTCACATTCCCTATT 2618 >seq5449 Length=2664 Score = 82.4 bits (90), Expect = 1e-13 Identities = 124/175 (71%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||||||| || ||| |||| ||||| ||||| Sbjct 2249 CTGTCTCACGACGTTCTGAACCCAGCTCACGTGCCGCTTTAATGGGCGAACAGACCAACC 2190 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| | ||| || || | ||| || ||||||||||||| | ||| | Sbjct 2189 CTTGAGACCTACTTCAGCCTC---AGGATGCGACGAGCCGACATCGAGGTGCCAACCCTC 2133 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 |||| ||||||| | || | | |||| ||||||||| ||||||||| Sbjct 2132 CCCGTCAATATGAACTTTCGGGGGAGATCAGCCTGTTATCCCTAGAGTAACTTTT 2078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854217602688