Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq5449 102 9e-20 seq2850 84.2 2e-14 seq20722 73.4 4e-11 >seq5449 Length=2664 Score = 102 bits (112), Expect = 9e-20 Identities = 59/61 (97%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1640 TACACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTT 1581 Query 173 A 173 | Sbjct 1580 A 1580 >seq2850 Length=5711 Score = 84.2 bits (92), Expect = 2e-14 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 171 |||||||||| |||||| ||||| |||||||||||||||||| |||||||| ||||||| Sbjct 336 TACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATTTTGCTACCTTTGGACCGT 394 >seq20722 Length=1135 Score = 73.4 bits (80), Expect = 4e-11 Identities = 43/45 (96%), Gaps = 0/45 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGC 157 || ||| |||||||||||||||||||||||||||||||||||||| Sbjct 774 TATACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGC 730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547086834252