Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq19519 129 1e-27 >seq19519 Length=3877 Score = 129 bits (142), Expect = 1e-27 Identities = 119/151 (79%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 47 TCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 106 ||| |||| ||| ||||| ||||||||||||||| ||||||||||||||| ||| | | Sbjct 1440 TCAAGCTTGCGCTCATTGCAGAATATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGGCTG 1499 Query 107 TGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGT 166 | | ||| | ||| |||| |||||| |||||||| ||| ||| |||| ||||||| || Sbjct 1500 TATTTCAATCCCAATGTGGCTGATCCCCCTCTCAGGGCAGCTACTGATCTTCGCCTTAGT 1559 Query 167 GAGCCATTACCTCACCAACTAGCTAATCCGA 197 | ||||| | || |||||||||||| || Sbjct 1560 AAAATATTACTTTACTAACTAGCTAATCAGA 1590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071771149440