Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq20323 75.2 1e-11 seq20093 75.2 1e-11 >seq20323 Length=13628 Score = 75.2 bits (82), Expect = 1e-11 Identities = 59/70 (84%), Gaps = 2/70 (3%) Strand=Plus/Minus Query 43 ATTATTCCATGCTAATGTATTC--GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCA 100 ||||||||||||| |||||| ||| | |||||||||| ||||||||| |||||||| Sbjct 8743 ATTATTCCATGCTGCAGTATTCAGGGGGGCAAGCCTGCTTGAAACACTCTATTTTTCTCA 8684 Query 101 AGGTAAAAGT 110 | |||||||| Sbjct 8683 AAGTAAAAGT 8674 >seq20093 Length=1701 Score = 75.2 bits (82), Expect = 1e-11 Identities = 81/106 (76%), Gaps = 9/106 (8%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC- 64 ||||||||||||||||||| || | ||||||| |||||||||||||| |||||| Sbjct 1133 CTAGAAACCAACAAAATAGAACCG-AGGTCCTATCTTATTATTCCATGCTGCAGTATTCA 1191 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 ||||| | ||||||||| ||||||||| |||||||| Sbjct 1192 GGGCG-------ACAANAAACACTCTATTTTTCTCAAAGTAAAAGT 1230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595076907432