Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq20093 134 1e-29 >seq20093 Length=1701 Score = 134 bits (148), Expect = 1e-29 Identities = 140/182 (77%), Gaps = 8/182 (4%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCAT 69 ||||||||||||| |||| ||||| ||| | | ||| |||||| | ||| Sbjct 1230 ACTTTTACTTTGAGAAAAATAGAGTGTTTNTTGTCGCCCT------GAATACTGCAGCAT 1177 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 ||||||||| ||||||| | |||||||||||||| ||||||||||||| ||||||| Sbjct 1176 GGAATAATAAGATAGGACCT-CGGTTCTATTTTGTTGGTTTCTAGGACCAAG-GTAATGA 1119 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | |||| ||| ||| ||||| | ||||| || ||||| ||||||||||||| ||||| Sbjct 1118 TTAATAGGGACAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATTTG 1059 Query 190 TT 191 || Sbjct 1058 TT 1057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511894113920