Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq5449 192 9e-47 seq8177 147 3e-33 >seq5449 Length=2664 Score = 192 bits (212), Expect = 9e-47 Identities = 145/169 (86%), Gaps = 4/169 (2%) Strand=Plus/Minus Query 109 GGTCCTCTCGTACTAA--GGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGG 166 |||||||||||||||| | | | || | |||| ||| || | | || |||||| || Sbjct 2313 GGTCCTCTCGTACTAAAAGAAAAACT--TTTCAATGTTCTTATGTCTACACCGGATATGG 2256 Query 167 ACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGC 226 ||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||| Sbjct 2255 ACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTGCCGCTTTAATGGGCGAACAGA 2196 Query 227 CCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||||| |||||||||||||| ||||||| ||||||||||||||| Sbjct 2195 CCAACCCTTGAGACCTACTTCAGCCTCAGGATGCGACGAGCCGACATCG 2147 >seq8177 Length=52231 Score = 147 bits (162), Expect = 3e-33 Identities = 122/149 (82%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 109 GGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGAC 168 |||||||||||||||| | ||| |||| ||| || | | || |||||| ||| Sbjct 43599 GGTCCTCTCGTACTAAAAGAAAAACCTTTCAATGTTCTTATGTCTACACCGGATATGGAT 43540 Query 169 CGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCC 228 |||||||||| |||||||||||| ||||||| |||||| || |||||||||||||| || Sbjct 43539 GGAACTGTCTCACGACGTTCTGAAGCCAGCTCACGTGCCGCTGTAATGGGCGAACAGACC 43480 Query 229 AACCCTTGGGACCTACTTCAGCCCCAGGA 257 |||||||| |||||||||||||| ||||| Sbjct 43479 AACCCTTGAGACCTACTTCAGCCTCAGGA 43451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780638523728