Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq19519 114 3e-23 >seq19519 Length=3877 Score = 114 bits (126), Expect = 3e-23 Identities = 114/148 (77%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 48 TCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 107 ||| |||||||| ||||| ||||||||||||||| ||||||||||||||| ||| | | Sbjct 1440 TCAAGCTTGCGCTCATTGCAGAATATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGGCTG 1499 Query 108 TGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGT 167 | | ||| | ||| |||||||| || |||||||| |||||| |||| |||||| || Sbjct 1500 TATTTCAATCCCAATGTGGCTGATCCCCCTCTCAGGGCAGCTACTGATCTTCGCCTTAGT 1559 Query 168 GGGCCATTACCCCGCCAACTAGCTAATC 195 ||||| | |||||||||||| Sbjct 1560 AAAATATTACTTTACTAACTAGCTAATC 1587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222139042048