Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq19519 156 1e-35 seq4135 84.2 7e-14 >seq19519 Length=3877 Score = 156 bits (172), Expect = 1e-35 Identities = 136/169 (80%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 164 TCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGA 223 ||||||||||||||| |||| |||| |||| ||||||| |||||||||| | ||||| Sbjct 1590 TCTGATTAGCTAGTTAGTAAAGTAATATTTTACTAAGGCGAAGATCAGTAGCTGCCCTGA 1531 Query 224 GAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGT 283 ||||| |||| |||||||||| | ||| | || | ||||||||||||||||||| ||||| Sbjct 1530 GAGGGGGATCAGCCACATTGGGATTGAAATACAGCCCAAACTCCTACGGGAGGCTGCAGT 1471 Query 284 GGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGA 332 |||||||||| ||||| || |||| ||| ||| || | ||||| Sbjct 1470 GGGGAATATTCTGCAATGAGCGCAAGCTTGACAGAGCGTCGTCACGTGA 1422 Score = 100 bits (110), Expect = 9e-19 Identities = 157/220 (71%), Gaps = 10/220 (5%) Strand=Plus/Minus Query 279 GCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATG 338 ||||||||||||||| ||||| || |||| ||| ||| || | ||||| || | Sbjct 1400 GCAGTGGGGAATATTCTGCAATGAGCGCAAGCTTGACAGAGCGTCGTCACGTGAAGGAAG 1341 Query 339 AAGGCCT--TCGGGTCGTAAAGCTCTGT--CCTCAAGGAAGATAATGACGGTACTTGAGG 394 | || | | || ||||| ||| | | | || | ||| |||| |||| || Sbjct 1340 ACAGCTTATTATAGTTGTAAACTTCTTTTGCTTAAAAGTGAATATTGAC---ACTTAAGT 1284 Query 395 AGG--AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTT 452 | ||| |||| |||| |||||||||||||||||||| ||| || | |||||| Sbjct 1283 AAATAAAGTATCGGCAAACTCCGTGCCAGCAGCCGCGGTAAAACGGGGGATACAAGCGTT 1224 Query 453 ATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTT 492 ||||||||||||| |||||||||| || ||||||||||| Sbjct 1223 ATCCGGAATTACT-GGGCGTAAAGTGTATGTAGGTGGTTT 1185 >seq4135 Length=22406 Score = 84.2 bits (92), Expect = 7e-14 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 200 GGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTC 259 ||||| ||||||||| | |||||||||| | || |||||||||| ||||| | | | | Sbjct 21432 GGCGAAGATCAGTAGGTGCCCTGAGAGGGCGGTCAGCCACATTGGGACTGAAATAAAGCC 21373 Query 260 CAAACTCCTACGGGAGGCAGCAGTGGGGAATATT 293 ||||| || ||||||| |||||||||||| || Sbjct 21372 CAAACATCTGTGGGAGGCTGCAGTGGGGAATCTT 21339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497280292352