Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq19519 107 5e-21 >seq19519 Length=3877 Score = 107 bits (118), Expect = 5e-21 Identities = 225/334 (67%), Gaps = 15/334 (4%) Strand=Plus/Minus Query 19 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 78 |||| |||| |||||||||||||||||||| ||| || | ||||||||||||||||| Sbjct 1272 CGGCAAACTCCGTGCCAGCAGCCGCGGTAAAACGGGGGATACAAGCGTTATCCGGAATTA 1213 Query 79 CTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAAC 138 |||||||||||| || |||||||||| |||| | | | | ||| || Sbjct 1212 CTGGGCGTAAAGTGTATGTAGGTGGTT--TTAA--TATATTTTTA----TATAAAAAAAA 1161 Query 139 CCCGGGACTGCTTTT-------GAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAA 191 | | | |||| ||| | ||||||| ||||| || |||| Sbjct 1160 CTATATATTTGTTTTTAATAAAAAAATTATTAAACTAGAGTTTGTTAGGGGTAAAAGGAA 1101 Query 192 TTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCT 251 || | | | || |||||||||| ||||| | | ||| |||| |||||||| | Sbjct 1100 TTTTTTGAGGAGTAGTGAAATGCGAAGATACAAAAAAGAAGACCAAAAGCGAAGGCATTT 1041 Query 252 TGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACC 311 | ||||| |||||||||||| |||||| || ||| || |||||||||||| Sbjct 1040 TACTGGAGCAATACTGACACTGAGATACGAAAGTTAAGGTAGCGAATGGGATTAGATACC 981 Query 312 CTGGTAGTCCACGCCGTAAACGATGAATACTAGG 345 | |||||| | |||||||||| ||||| || Sbjct 980 CCAGTAGTCTTAACTGTAAACGATGGATACTCGG 947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202943140864