Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq20093 251 1e-64 >seq20093 Length=1701 Score = 251 bits (278), Expect = 1e-64 Identities = 212/258 (82%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTAT-CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||| | || || | | | ||||||| |||||||||||||||||||| Sbjct 536 CTTCTTAGAGGGACTTTGCGTGTCTAACGCAAGGAAGTTCGAGGCAATAACAGGTCTGTG 477 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||||||||||||||| |||||||||||||||||| | ||||||||| | | Sbjct 476 ATGCCCTTAGATGTTCTGGGCTGCACGCGCGCTACACTGATGCATGCAACGAGTTTTT-A 418 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||| ||| || |||||||||||||| | | ||||| |||||||||| |||| Sbjct 417 CCTTGCCCGATGGGGCTGGGTAATCTTGTGAGGGTGCATCGTGATGGGGATAGATTATTG 358 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| ||||||||||||||||||||||| |||| |||| |||| ||| || | Sbjct 357 CAATTATTAGTCTTCAACGAGGAATGCCTAGTAGGCGCAAGTCAGCAGCTTGCGCCGACT 298 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||| ||||| Sbjct 297 ACGTCCCTGCCCCTTGTA 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946997791744