Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq5449 140 1e-30 seq2850 100 1e-18 seq20722 78.8 3e-12 >seq5449 Length=2664 Score = 140 bits (154), Expect = 1e-30 Identities = 95/107 (89%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 372 AGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTT 431 |||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 1658 AGACAGCATCCAAGTCGTTACACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTT 1599 Query 432 CGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 ||||||||| ||| ||||||||||| |||||||||||||| |||| Sbjct 1598 CGCTACCTTTGGACCGTTATAGTTACAGCCGCCGTTTACTGGAGCTT 1552 >seq2850 Length=5711 Score = 100 bits (110), Expect = 1e-18 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 |||||| ||| ||||||||| |||||| |||||| ||||| ||||||||||||||||| Sbjct 317 GAGACATTAGGAAAGTCGTTACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATT 376 Query 431 TCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 | |||||||| ||| || | | |||| ||||||||||| Sbjct 377 TTGCTACCTTTGGACCGTCA-AATTACAGCCGCCGTTTAC 415 >seq20722 Length=1135 Score = 78.8 bits (86), Expect = 3e-12 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 384 AGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGC 434 |||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 780 AGTCGTTATACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGC 730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702036571648