Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2830 269 4e-70 seq2729 269 4e-70 seq2511 269 4e-70 seq1943 269 4e-70 seq389 269 4e-70 seq2075 257 3e-66 seq912 152 8e-35 >seq2830 Length=2012 Score = 269 bits (298), Expect = 4e-70 Identities = 202/232 (87%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||| ||||||||| || || ||| |||| | ||||| |||| ||||||| ||| | Sbjct 297 GTACAAGAGGCAGGGACTTAATCGGCGCAAGCT-GCTGACTTGCGCCTACTAGGCATT-C 354 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 ||||||||||| || ||||||||| ||||||||||||||||||| | ||||| |||| Sbjct 355 CTCGTTGAAGATTAATAATTGCAATAATCTATCCCCATCACGATGCACACTCAAAAGATT 414 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||||||||||||||| | | |||||||| || |||||||||||||||||||| Sbjct 415 ACCCAGACCTGTCGGCCAAGGTAAAA-ACTCGTTGCATGCATCAGTGTAGCGCGCGTGCA 473 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 474 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTG 525 >seq2729 Length=19671 Score = 269 bits (298), Expect = 4e-70 Identities = 202/232 (87%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||| ||||||||| || || ||| |||| | ||||| |||| ||||||| ||| | Sbjct 7766 GTACAAGAGGCAGGGACTTAATCGGCGCAAGCT-GCTGACTTGCGCCTACTAGGCATT-C 7823 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 ||||||||||| || ||||||||| ||||||||||||||||||| | ||||| |||| Sbjct 7824 CTCGTTGAAGATTAATAATTGCAATAATCTATCCCCATCACGATGCACACTCAAAAGATT 7883 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||||||||||||||| | | |||||||| || |||||||||||||||||||| Sbjct 7884 ACCCAGACCTGTCGGCCAAGGTAAAA-ACTCGTTGCATGCATCAGTGTAGCGCGCGTGCA 7942 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 7943 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTG 7994 >seq2511 Length=2328 Score = 269 bits (298), Expect = 4e-70 Identities = 202/232 (87%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||| ||||||||| || || ||| |||| | ||||| |||| ||||||| ||| | Sbjct 602 GTACAAGAGGCAGGGACTTAATCGGCGCAAGCT-GCTGACTTGCGCCTACTAGGCATT-C 545 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 ||||||||||| || ||||||||| ||||||||||||||||||| | ||||| |||| Sbjct 544 CTCGTTGAAGATTAATAATTGCAATAATCTATCCCCATCACGATGCACACTCAAAAGATT 485 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||||||||||||||| | | |||||||| || |||||||||||||||||||| Sbjct 484 ACCCAGACCTGTCGGCCAAGGTAAAA-ACTCGTTGCATGCATCAGTGTAGCGCGCGTGCA 426 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 425 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTG 374 >seq1943 Length=707543 Score = 269 bits (298), Expect = 4e-70 Identities = 202/232 (87%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||| ||||||||| || || ||| |||| | ||||| |||| ||||||| ||| | Sbjct 543989 GTACAAGAGGCAGGGACTTAATCGGCGCAAGCT-GCTGACTTGCGCCTACTAGGCATT-C 543932 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 ||||||||||| || ||||||||| ||||||||||||||||||| | ||||| |||| Sbjct 543931 CTCGTTGAAGATTAATAATTGCAATAATCTATCCCCATCACGATGCACACTCAAAAGATT 543872 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||||||||||||||| | | |||||||| || |||||||||||||||||||| Sbjct 543871 ACCCAGACCTGTCGGCCAAGGTAAAA-ACTCGTTGCATGCATCAGTGTAGCGCGCGTGCA 543813 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 543812 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTG 543761 >seq389 Length=1148824 Score = 269 bits (298), Expect = 4e-70 Identities = 202/232 (87%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||| ||||||||| || || ||| |||| | ||||| |||| ||||||| ||| | Sbjct 948283 GTACAAGAGGCAGGGACTTAATCGGCGCAAGCT-GCTGACTTGCGCCTACTAGGCATT-C 948226 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 ||||||||||| || ||||||||| ||||||||||||||||||| | ||||| |||| Sbjct 948225 CTCGTTGAAGATTAATAATTGCAATAATCTATCCCCATCACGATGCACACTCAAAAGATT 948166 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||||||||||||||| | | |||||||| || |||||||||||||||||||| Sbjct 948165 ACCCAGACCTGTCGGCCAAGGTAAAA-ACTCGTTGCATGCATCAGTGTAGCGCGCGTGCA 948107 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 948106 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTG 948055 Score = 269 bits (298), Expect = 4e-70 Identities = 202/232 (87%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||| ||||||||| || || ||| |||| | ||||| |||| ||||||| ||| | Sbjct 975864 GTACAAGAGGCAGGGACTTAATCGGCGCAAGCT-GCTGACTTGCGCCTACTAGGCATT-C 975807 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 ||||||||||| || ||||||||| ||||||||||||||||||| | ||||| |||| Sbjct 975806 CTCGTTGAAGATTAATAATTGCAATAATCTATCCCCATCACGATGCACACTCAAAAGATT 975747 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||||||||||||||| | | |||||||| || |||||||||||||||||||| Sbjct 975746 ACCCAGACCTGTCGGCCAAGGTAAAA-ACTCGTTGCATGCATCAGTGTAGCGCGCGTGCA 975688 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 975687 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTG 975636 >seq2075 Length=3612 Score = 257 bits (284), Expect = 3e-66 Identities = 200/232 (86%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||| ||||||||| || || ||| |||| | ||||| |||| ||||||| ||| Sbjct 600 GTACAAGAGGCAGGGACTTAATCGGCGCAAGCT-GCTGACTTGCGCCTACTAGGCATT-- 544 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 ||||| ||||| || ||||||||| ||||||||||||||||||| | ||||| |||| Sbjct 543 CTCGT-GAAGATTAATAATTGCAATAATCTATCCCCATCACGATGCACACTCAAAAGATT 485 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||||||||||||||| | | |||||||| || |||||||||||||||||||| Sbjct 484 ACCCAGACCTGTCGGCCAAGGTAAAA-ACTCGTTGCATGCATCAGTGTAGCGCGCGTGCA 426 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 425 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTG 374 >seq912 Length=352595 Score = 152 bits (168), Expect = 8e-35 Identities = 138/171 (81%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 59 TCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GA 117 ||||||||||| | ||||| ||| ||| |||||| ||| |||| | ||||| || Sbjct 284193 TCCTCGTTGAAATTTAGTAATTGAAATAATCAATCCCCGTCATGATGCACGCTCAAAAGA 284252 Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 ||||| ||| ||||||||||||| | | |||||||| || |||| || |||||||||| Sbjct 284253 CTACCCAGACTTGTCGGCCAAGGT-AGAAACTCGTTGCATGCATCGGTTAAGCGCGCGTG 284311 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 | ||||||| |||||| | | ||||||||||||||||||||||||||||| Sbjct 284312 CAGCCCAGACCATCTACAGCCGTCACAGACCTGTTATTGCCTCAAACTTCC 284362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751966015475