Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2830 262 7e-68 seq2729 262 7e-68 seq1943 262 7e-68 seq389 262 7e-68 seq2470 138 2e-30 seq1988 89.7 9e-16 >seq2830 Length=2012 Score = 262 bits (290), Expect = 7e-68 Identities = 212/250 (85%), Gaps = 5/250 (2%) Strand=Plus/Minus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTC-GAATACATTAGC 128 ||||||||||||| |||| ||||||||| |||||||| | | || | |||||| ||| Sbjct 1190 ACTTTTACTTTGAGAAAAATAGAGTGTTTCAAGCAGGCTTGTCGCCCTGAATACTGCAGC 1131 Query 129 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATG 188 ||||||||||| ||||||| | |||||||||||||||||||||||||||| |||||| Sbjct 1130 ATGGAATAATAAGATAGGACCT-CGGTTCTATTTTGTTGGTTTCTAGGACCAAGGTAATG 1072 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||||||||| ||| ||||| | ||||| || ||||||||||||||||||| ||||| Sbjct 1071 ATTAATAGGGACAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATTT 1012 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 || ||||| ||||||||||||||| || |||||||||||||||||||||| |||||| Sbjct 1011 GTTAAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGA 953 Query 309 AAGTTAGGGG 318 || |||||| Sbjct 952 CAG-TAGGGG 944 >seq2729 Length=19671 Score = 262 bits (290), Expect = 7e-68 Identities = 212/250 (85%), Gaps = 5/250 (2%) Strand=Plus/Minus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTC-GAATACATTAGC 128 ||||||||||||| |||| ||||||||| |||||||| | | || | |||||| ||| Sbjct 8659 ACTTTTACTTTGAGAAAAATAGAGTGTTTCAAGCAGGCTTGTCGCCCTGAATACTGCAGC 8600 Query 129 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATG 188 ||||||||||| ||||||| | |||||||||||||||||||||||||||| |||||| Sbjct 8599 ATGGAATAATAAGATAGGACCT-CGGTTCTATTTTGTTGGTTTCTAGGACCAAGGTAATG 8541 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||||||||| ||| ||||| | ||||| || ||||||||||||||||||| ||||| Sbjct 8540 ATTAATAGGGACAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATTT 8481 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 || ||||| ||||||||||||||| || |||||||||||||||||||||| |||||| Sbjct 8480 GTTAAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGA 8422 Query 309 AAGTTAGGGG 318 || |||||| Sbjct 8421 CAG-TAGGGG 8413 >seq1943 Length=707543 Score = 262 bits (290), Expect = 7e-68 Identities = 212/250 (85%), Gaps = 5/250 (2%) Strand=Plus/Plus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTC-GAATACATTAGC 128 ||||||||||||| |||| ||||||||| |||||||| | | || | |||||| ||| Sbjct 543096 ACTTTTACTTTGAGAAAAATAGAGTGTTTCAAGCAGGCTTGTCGCCCTGAATACTGCAGC 543155 Query 129 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATG 188 ||||||||||| ||||||| | |||||||||||||||||||||||||||| |||||| Sbjct 543156 ATGGAATAATAAGATAGGACCT-CGGTTCTATTTTGTTGGTTTCTAGGACCAAGGTAATG 543214 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||||||||| ||| ||||| | ||||| || ||||||||||||||||||| ||||| Sbjct 543215 ATTAATAGGGACAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATTT 543274 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 || ||||| ||||||||||||||| || |||||||||||||||||||||| |||||| Sbjct 543275 GTTAAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGA 543333 Query 309 AAGTTAGGGG 318 || |||||| Sbjct 543334 CAG-TAGGGG 543342 >seq389 Length=1148824 Score = 262 bits (290), Expect = 7e-68 Identities = 212/250 (85%), Gaps = 5/250 (2%) Strand=Plus/Plus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTC-GAATACATTAGC 128 ||||||||||||| |||| ||||||||| |||||||| | | || | |||||| ||| Sbjct 947390 ACTTTTACTTTGAGAAAAATAGAGTGTTTCAAGCAGGCTTGTCGCCCTGAATACTGCAGC 947449 Query 129 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATG 188 ||||||||||| ||||||| | |||||||||||||||||||||||||||| |||||| Sbjct 947450 ATGGAATAATAAGATAGGACCT-CGGTTCTATTTTGTTGGTTTCTAGGACCAAGGTAATG 947508 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||||||||| ||| ||||| | ||||| || ||||||||||||||||||| ||||| Sbjct 947509 ATTAATAGGGACAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATTT 947568 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 || ||||| ||||||||||||||| || |||||||||||||||||||||| |||||| Sbjct 947569 GTTAAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGA 947627 Query 309 AAGTTAGGGG 318 || |||||| Sbjct 947628 CAG-TAGGGG 947636 Score = 262 bits (290), Expect = 7e-68 Identities = 212/250 (85%), Gaps = 5/250 (2%) Strand=Plus/Plus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTC-GAATACATTAGC 128 ||||||||||||| |||| ||||||||| |||||||| | | || | |||||| ||| Sbjct 974971 ACTTTTACTTTGAGAAAAATAGAGTGTTTCAAGCAGGCTTGTCGCCCTGAATACTGCAGC 975030 Query 129 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATG 188 ||||||||||| ||||||| | |||||||||||||||||||||||||||| |||||| Sbjct 975031 ATGGAATAATAAGATAGGACCT-CGGTTCTATTTTGTTGGTTTCTAGGACCAAGGTAATG 975089 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||||||||| ||| ||||| | ||||| || ||||||||||||||||||| ||||| Sbjct 975090 ATTAATAGGGACAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATTT 975149 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 || ||||| ||||||||||||||| || |||||||||||||||||||||| |||||| Sbjct 975150 GTTAAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGA 975208 Query 309 AAGTTAGGGG 318 || |||||| Sbjct 975209 CAG-TAGGGG 975217 >seq2470 Length=2555 Score = 138 bits (152), Expect = 2e-30 Identities = 114/135 (84%), Gaps = 3/135 (2%) Strand=Plus/Minus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTC-GAATACATTAGC 128 ||||||||||||| |||| ||||||||| |||||||| | | || | |||||| | | Sbjct 135 ACTTTTACTTTGAGAAAAATAGAGTGTTTCAAGCAGGCTTGTCGCCCTGAATACTGCACC 76 Query 129 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATG 188 ||||||||||| ||||||| | |||||||||||||||||||||||||||| |||||| Sbjct 75 ATGGAATAATAAGATAGGACCT-CGGTTCTATTTTGTTGGTTTCTAGGACCAAGGTAATG 17 Query 189 ATTAATAGGGATAGT 203 ||||||||||| ||| Sbjct 16 ATTAATAGGGACAGT 2 >seq1988 Length=198686 Score = 89.7 bits (98), Expect = 9e-16 Identities = 77/94 (82%), Gaps = 1/94 (1%) Strand=Plus/Plus Query 110 TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGT 169 ||| || ||||| |||||||||||| || ||||||| | ||||||||||||||| || Sbjct 57608 TTTTCTGTAATACTCCAGCATGGAATAAAAGGATAGGACTT-CGGTTCTATTTTGTTCGT 57666 Query 170 TTCTAGGACCGCCGTAATGATTAATAGGGATAGT 203 |||| ||||| ||||| |||||||| ||| ||| Sbjct 57667 TTCTGGGACCAACGTAACGATTAATAAGGACAGT 57700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915157305920