Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq4665 100 7e-19 seq3816 100 7e-19 seq1834 100 7e-19 >seq4665 Length=34750 Score = 100 bits (110), Expect = 7e-19 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 15 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCG 74 ||| | |||| |||| |||||||||||||||||||| ||| || | ||||||||| || Sbjct 1298 AAGTATCGGCAAACTCCGTGCCAGCAGCCGCGGTAAAACGGGGGATACAAGCGTTATCCG 1239 Query 75 GAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 ||||||||||||||||||||| | ||| |||| Sbjct 1238 GAATTACTGGGCGTAAAGCGTATGTAGGTGGTT 1206 Score = 100 bits (110), Expect = 7e-19 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 15 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCG 74 ||| | |||| |||| |||||||||||||||||||| ||| || | ||||||||| || Sbjct 33424 AAGTATCGGCAAACTCCGTGCCAGCAGCCGCGGTAAAACGGGGGATACAAGCGTTATCCG 33483 Query 75 GAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 ||||||||||||||||||||| | ||| |||| Sbjct 33484 GAATTACTGGGCGTAAAGCGTATGTAGGTGGTT 33516 >seq3816 Length=5097 Score = 100 bits (110), Expect = 7e-19 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 15 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCG 74 ||| | |||| |||| |||||||||||||||||||| ||| || | ||||||||| || Sbjct 4061 AAGTATCGGCAAACTCCGTGCCAGCAGCCGCGGTAAAACGGGGGATACAAGCGTTATCCG 4120 Query 75 GAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 ||||||||||||||||||||| | ||| |||| Sbjct 4121 GAATTACTGGGCGTAAAGCGTATGTAGGTGGTT 4153 >seq1834 Length=313589 Score = 100 bits (110), Expect = 7e-19 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 15 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCG 74 ||| | |||| |||| |||||||||||||||||||| ||| || | ||||||||| || Sbjct 115508 AAGTATCGGCAAACTCCGTGCCAGCAGCCGCGGTAAAACGGGGGATACAAGCGTTATCCG 115567 Query 75 GAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 ||||||||||||||||||||| | ||| |||| Sbjct 115568 GAATTACTGGGCGTAAAGCGTATGTAGGTGGTT 115600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289539840160